Example Files:
This page provides examples for the ISA-TAB-Nano Investigation files, leveraging data from the Nanotechnology Characterization Laboratory (NCL) as an example (NCL200612A).
TABLE 1. ISA-TAB-Nano Investigation File Extensions to ISA-TAB
Section |
Field |
Field Status (if applicable) |
---|---|---|
INVESTIGATION |
Investigation disease |
Required |
INVESTIGATION |
Investigation disease term accession number |
Required |
INVESTIGATION |
Investigation disease term source REF |
Required |
INVESTIGATION |
Investigation outcome |
Optional |
STUDY |
Study disease |
Required |
STUDY |
Study disease term accession number |
Required |
STUDY |
Study disease term source REF |
Required |
STUDY |
Study outcome |
Optional |
STUDY ASSAYS |
Study assay measurement name |
Required |
STUDY ASSAYS |
Study assay measurement name term accession number |
Required |
STUDY ASSAYS |
Study assay measurement name term source REF |
Required |
Ontology Source Reference
TABLE 2: Example Investigation File Ontology Source Reference Section
!inv_ontology.PNG,alt="file as identified"!
Investigation
TABLE 3: Example Investigation File Investigation Section
!inv.PNG,alt="file as identified"!
Investigation Contacts
TABLE 4: Example Investigation File Investigation Contacts Section
!inv_contacts.PNG,alt="file as identified"!
Investigation Publication
TABLE 5. Example Investigation Publication Section
!inv_publications.PNG,alt="file as identified"!
Study
TABLE 6. Example Investigation File Study Section
!inv_study.PNG,alt="file as identified"!
Study Design Descriptors
TABLE 7. Example Investigation File Study Design Descriptors Section
!inv_study_design.png,alt="file as identified"!
Study Contacts
TABLE 8. Example Investigation File Study Contacts Section
!inv_study_contacts.png,alt="file as identified"!
Study Publications
TABLE 9. Example Investigation File Study Publications Section
!inv_study_publications.PNG,alt="file as identified"!
Study Assays
TABLE 10. Example Investigation File Study Assays Section
!inv_study_assay.PNG,alt="file as identified"!
Study Factors
TABLE 11. Example Investigation File Study Factors Section
!inv_study_factors.PNG,alt="file as identified"!
Study Protocols
TABLE 12. Example Investigation File Study Protocols Section
!inv_study_protocols.PNG,alt="file as identified"!