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Document Information

Author: Traci St.Martin, Tom Johnson
Email: stmartin.traci@mayo.edu
Team: LexEVS
Contract: 28SX112
Client: NCI CBIIT
National Institutes of Heath
US Department of Health and Human Services

Contents

Sign off

Date

Role

CBIIT or Stakeholder Organization

 


 


 


 


 


 


The purpose of this document is to collect, analyze, and define high-level needs and features of the National Cancer Institute Center for Biomedical Informatics and Information Technology (NCI CBIIT) caCORE LexEVS Release 5.0. This document focuses on the functionalities proposed by the product stakeholders and target users in order to make it a better product. The use-case and supplementary specifications document will detail how the framework will fulfill these needs.

Vision and Needs

The objective of this release of the LexEVS 5.0 is to:

  • Complete EVS shift to LexBIG API (LexEVS)
  • Introduce LexGrid based Query By Example services
  • Focus on ease of adoption (EVS to LexEVS Migration)
  • BDA process
  • Unified OWL loader
  • Gold compatibility 
  • Consistent naming/release numbers

Current Solution

EVS 4.2

Proposed Solutions

LexEVS 5.0

Functional Requirements

Each enhancement, modification or new feature is described in detail below.

GForge number
(hyperlinked)

Brief description of functional requirement
(enhancement or new feature)

Iteration
(Approved or Proposed)

 

 

 

 

 

 

 

 

 

 

 

 

Functional Bug Fixes

Each bug fix included in this release is described in detail below.

GForge number
(hyperlinked)

Brief description of bug

Iteration
(Approved or Proposed)

10524

Improve scalability of OWL loader

 

14262

Does not throw exception when exceed search limit

 

14304

Support caMOD Tree Generation

 

14974

Make use of logging consistent. Eliminate System out

 

15091

Implement getAssociation for EVS API web service

 

15092

Implement tree browsing for web services

 

15222

Remove convenience methods for nameToCode

 

15449

Matching algorithms, exactmatch and startsWith, fail

 

15667

gov.nih.nci.evs.domain.Atom.getLUI does not return value

 

15942

Update to work with SDK 4.1

 

15975

The NCI_Thesaurus association Has_Salt_Form and Has_Free_Acid_Or_Base needs reverse name.

 

15976

Two constructors create ConceptReferenceList methods throw exceptions

 

16508

Example to dump/query auxiliary metadata

 

16579

Better error handling for invalid search criteria in http interface

 

16678

Serializer Exception on org.apach.lucene.search.regex.JavaUtilRegexCapabilities

 

16686

Javadocs should open in new window

 

 

 

 

 

 

 

Non-Functional Requirements

This section describes in detail all the related requirements which must be met for this release but do not add functionality. These requirements are included in the scope and project plan due to level of effort or relative importance to the overall success of delivery of the release.

GForge number (hyperlinked)

Brief description of non-functional requirement

Iteration
(Approved or Proposed)

 

Project plan for 5.0

 

 

Release notes for 5.0

 

 

Update Tech and Admin Guide for 5.0

 

 

Create Migration Guide for 5.0

 

 

Deployment to Dev Tier

 

 

Deployment to QA Tier

 

 

Deployment to Stage Tier

 

 

Deployment to Production Tier

 

General Support Activities

This section describes in detail all the related activities which must be performed for this release but do not add functionality. These activities are included in the scope and project plan due to level of effort or relative importance to the overall success of delivery of the release.

GForge number (hyperlinked)

Brief description of general support activity

Iteration
(Approved or Proposed)

 

Example, "Level 2 Support, integration of help and training to the user community."

 

 

 

 

 

 

 

 

 

 

Stakeholder Summary

Customer Name

Role

Interest/Need

Avinash Shanbhag

NCICB Application Infrastructure

Oversees NCICB caCORE Software Engineering

Frank Hartel 

 

Directs EVS Projects

Denise Warzel

CORE Product Line Manager

Trans-CORE requirement coordination

Gilberto Fragoso

Associate Director EVS Infrastructure

Technical Direction

Johnita Beasley

Project Manager

Technical Direction and Implementation

Jason Lucas

Project Manager

Project schedule and task management

Tom Johnson

Mayo Clinic Technical Project Manager/Engineering Lead

Technical Direction and Implementation

Traci St.Martin

Mayo Clinic Project Manager

Project schedule and task management

CBIIT Staff/Contractor Name

Role

Responsibilities

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[Role in this project]

 

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Technical Environment

This product uses the following technical components which have been derived from the current NCICB Technology Stack.

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Client Interface

  • [Example, Internet Explorer 6.0 and above]]]></ac:plain-text-body></ac:structured-macro>
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Application Server

[Example, Apache Tomcat 5.5.9]

]]></ac:plain-text-body></ac:structured-macro>

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Database Server

[Example, Oracle 9i]

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Operating System

  • [Example, Windows 2000. XP, Vista]]]></ac:plain-text-body></ac:structured-macro>
    <ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="7c0a7c33-e058-4ad2-b05c-bdf625d35100"><ac:plain-text-body><![CDATA[* [Example, Unix (Sun Solaris)]

]]></ac:plain-text-body></ac:structured-macro>

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[Other]

 

]]></ac:plain-text-body></ac:structured-macro>

Product Dependencies

This release is dependent on the caCORE components or products documented in the CORE Product Dependency Matrix.

[Provide additional explanation as applicable. For example, "The EVS vocabulary systems are used by the Java client to retrieve and validate concept information for naming and defining meanings."]

Out of Scope Items

Items that are out of scope were evaluated as part of the initial scoping activities for this release, and subsequently not included in the final approved scope. These items are also documented in the cumulative backlog of requirements found on the product GForge site. They include out-of-scope functional requirements (enhancements or new features), bug fixes, non-functional requirements, and general support activities.

GForge number (hyperlinked)

Brief description of item moved from the in-scope section
with brief explanation added of why it was not included in this release

Iteration during which the item
was removed from in-scope

 

 

 

 

 

 

 

 

 

 

 

 

Document History

Document Version:

Click the Info tab. View the Recent Changes or click the link to view the page history.

Last Modified:

Refer to the first line displayed in the document window.

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Project GForge site:

[Project GForge site link]

]]></ac:plain-text-body></ac:structured-macro>

Most current version:

Unless the display includes a notice that you are viewing a previous version, you are viewing the most current version of this Scope Document for the release indicated in the title.

Revision history:

Click the Info tab. In the Recent Changes area, click the link to view the page history.

Review history:

Click the Info tab. In the Recent Changes area, note the developer who made each change and the date and time. Refer to the Key People Directory for their roles. Click the link to view any page or to view the page history, and then click the link for a page. When the page opens, view the comments and changes made in that version.

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Related documents:

[Name and URL of each related document]

]]></ac:plain-text-body></ac:structured-macro>

Project Information

CBIIT Management

Role

Responsibilities

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[Name]

Product Manager

Oversees development of the product: features, functions, definition of stakeholders, priorities within the scope, timeframe for release

]]></ac:plain-text-body></ac:structured-macro>

Avinash Shanbhag

Engineering Manager

Oversees NCICB caCORE software engineering practices, conducts design reviews, guides technical development

Denise Warzel

Product Line Manager

Oversees NCICB caCORE product line. Responsible for overall product integration, major and minor release cycles. Supports Product Manager.

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