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SYNOPSIS:

SpecL is a new declarative information modeling system developed at the Cold Spring Harbor Laboratory (CSHL) to create large complex software projects. The next generation sequencing LIMS for the CSHL Woodbury Genome Center was just completed using SpecL at its core. Traditional modeling techniques rooted in relational theory are simply not appropriate for capturing the full story of cancer research as it is emerges from laboratories across the United States and the globe. The coordination of new ideas, new processes, new workflows, new technologies, new experimental protocols, experimental designs, specific aims, intermediate results, partial results, negative results, and final published positive results require a rethink of how data and information are modeled. Data complexity, volume and size have further exacerbated the disconnect between what current methods can deliver and what is actually needed to get the job done. SpecL was designed to capture rich data models that cross cut many concerns including access, compliance, presentation, storage, and behavior. Session details...

BIOs:

Anthony Leotta earned a B.S. in Electrical Engineering from Clarkson University, Potsdam, New York, and an M.S. in Computer Science from NYU Poly, Brooklyn, New York. He joined the Wigler Lab at CSHL in 2005 as an informatics data manager specialist. He develops databases, processing pipelines, and interactive visualization software and tools. Prior to joining CSHL, Mr. Leotta was employed as a software developer for a variety of industries including financial, telecommunications, and defense.

SUMMARY:

Topic: SpecL, Information Modeling from the Top Down

Speaker: Anthony Leotta

Date: Wednesday, May 15, 2013

Time: 11 AM – 12 PM

Presentation: A screen cast of the presentation will be available for viewing after the event here on our Speaker Series Videos page and on the CBIIT Speaker Series YouTube Playlist Exit Disclaimer logo .

About the NCI CBIIT Speaker Series:

The National Cancer Institute (NCI) Center for Biomedical Informatics and Information Technology (CBIIT) Speaker Series is a bi-weekly knowledge-sharing forum featuring both internal and external speakers on topics of interest to the biomedical informatics and research communities. For additional information, including past speaker series presentations, visit the CBIIT Speaker Series page.

Questions? Please email us at NCICBIITcomms@mail.nih.gov.

Individuals with disabilities who need reasonable accommodation to participate in this program should contact the Office of Space and Facilities Management (OSFM) at 240-276-5900 or the Federal TTY Relay number 1-800-877-8339.

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