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Primary molecular target data (excluding microarray data)

includes protein, mRNA, miRNA, DNA methylation, mutations, SNPs, enzyme activity, metabolites

 WEB_DATA_ALL_MT.ZIPA 3.4 Mb zip file -
The uncompressed file is approximately 82.7 Mb.

When uncompressed the file is comma delimited in the following format:

File Format: MOLTID (NCI pattern #), GENE, TITLE, MOLTNBR (NCI exp. id #), PANELNBR, CELLNBR, pname, cellname, ENTITY_MEASURED, GeneID, UNITS, METHOD, VALUE, TEXT

Protein Data Only

A subset of WEB_DATA_ALL_MT containing just the protein data

WEB_DATA_PROTEIN.ZIP  A 219 Kb zip file -
The uncompressed file is approximately 3.2 Mb.

When uncompressed the file is comma delimited in the following format:

File Format: MOLTID (NCI pattern #), GENE, TITLE, MOLTNBR (NCI exp. id #), PANELNBR, CELLNBR, pname, cellname, ENTITY_MEASURED, GeneID, UNITS, METHOD, VALUE, TEXT

DNA Data Only

A subset of WEB_DATA_ALL_MT containing just the DNA data

WEB_DATA_DNA.ZIPA 26 kb zip file -
The uncompressed file is approximately 580 Kb.

When uncompressed the file is comma delimited in the following format:

File Format: MOLTID (NCI pattern #), GENE, TITLE, MOLTNBR (NCI exp. id #), PANELNBR, CELLNBR, pname, cellname, ENTITY_MEASURED, GeneID, UNITS, METHOD, VALUE, TEXT

DNA Methylation Data From Sequenom

A subset of WEB_DATA_ALL_MT containing just the DNA methylation data, Proc Natl Acad Sci USA 2008, Mar 25; 105(12): 4844-9.

WEB_DATA_SEQUENOM_METHYLATION.ZIP A 5.2 Mb zip file -
The uncompressed file is approximately 43.8 Mb.

When uncompressed the file is comma delimited in the following format:

File Format: MOLTID (NCI pattern #), GENE, TITLE, MOLTNBR (NCI exp. id #), PANELNBR, CELLNBR, pname, cellname, ENTITY_MEASURED, GeneID, VALUE

microRNA Data From the Israel Lab

A subset of WEB_DATA_ALL_MT containing just the microRNA data from the Israel lab. Cancer Res. 2007, Mar 15; 67(6): 2456-68.

WEB_DATA_ISRAEL_MIR.ZIP A 98 Kb zip file -
The uncompressed file is approximately 1.1 Mb.

When uncompressed the file is comma delimited in the following format:

File Format: MOLTID (NCI pattern #), TITLE, MOLTNBR (NCI exp. id #), PANELNBR, CELLNBR, pname, cellname, ENTITY_MEASURED, UNITS, METHOD, VALUE, TEXT

microRNA Data From the Weinstein and Croce Labs

A subset of WEB_DATA_ALL_MT containing just the microRNA data from the Weinstein and Croce labs. Mol Cancer Ther 2007, May; 6(5): 1483-91.

WEB_DATA_CROCE-WEINSTEIN_MIR.ZIP A 601 Kb zip file -
The uncompressed file is approximately 6.3 Mb.

When uncompressed the file is comma delimited in the following format:

File Format: MOLTID (NCI pattern #), TITLE, MOLTNBR (NCI exp. id #), PANELNBR, CELLNBR, pname, cellname, ENTITY_MEASURED, UNITS, METHOD, VALUE, TEXT

Metabolomic Data From Metabolon- data averaged from triplicate experiments

A subset of WEB_DATA_ALL_MT containing just the metabolomic data from Metabolon.

WEB_DATA_METABOLON.ZIP  A 171 Kb zip file -
The uncompressed file is approximately 1.2 Mb.

When uncompressed the file is comma delimited in the following format:

File Format: MOLTID (NCI pattern #), TITLE, MOLTNBR (NCI exp. id #), PANELNBR, CELLNBR, pname, cellname, VALUE, STD DEV

Metabolomic Data From Metabolon - individual data from each of the triplicate experiments

WEB_DATA_METABOLON_ALL.ZIPA 404 Kb zip file -
The uncompressed file is approximately 3.2 Mb.

When uncompressed the file is comma delimited in the following format:

File Format: SAMPLENAME, TITLE, PANELNBR, CELLNBR, pname, cellname, VALUE







 

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