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National Cancer Institute Center for Bioinformatics
Protege 1.4.1 Patch Release Notes
26 February 2010

Product Changes

The main objective of this patch release of Protege 1.4.1 is to provide fixes to performance bugs found after the initial release of Protege 1.4.1.  This patch release improves performance for batch loads and batch editing.

New Feature Highlights

* 2948:  Object properties available in role construction dialog are restricted according to the domain of the class that the role is being asserted on

* 6082:  Forward and Backward navigation buttons have been enabled in the NCIEditTab.

* 16121:  Buttons to make a class Defined or Primitive have been added to the NCIEditTab.  If the entire list of Necessary conditions is to be made Necessary and Sufficient, the conditions don't need to be made defining one at a time, pressing the appropriate button makes all these conditions N&S.  The same applies to making a class primitive starting from a defined class.  Individual conditions can still be made either defining or non-defining as necessary.

* 21375:  Internal format of complex properties has been modified.  An xml schema is now used to specify the format.  This affects batch editing jobs that include complex properties.  The format to use for DEFINITION and ALT_DEFINITION in a batch edit is:

<ncicp:ComplexDefinition xmlns:ncicp="http://ncicb.nci.nih.gov/xml/owl/EVS/ComplexProperties.xsd#"><ncicp:def-definition>Text of DEFINITION.</ncicp:def-definition><ncicp:def-source>NCI or some other</ncicp:def-source><ncicp:attr>some attribution</ncicp:attr><ncicp:Definition_Reviewer_Name>Someone's name</ncicp:Definition_Reviewer_Name><ncicp:Definition_Review_Date>a date in YYMMDD format</ncicp:Definition_Review_Date></ncicp:ComplexDefinition> 

If no attribution is required the entire set of tags can be eliminated from the above.  And the format for a FULL_SYN is:

 <ncicp:ComplexTerm xmlns:ncicp="http://ncicb.nci.nih.gov/xml/owl/EVS/ComplexProperties.xsd#"><ncicp:term-name>some term</ncicp:term-name><ncicp:term-group>PT or another type</ncicp:term-group><ncicp:term-source>NCI or another source</ncicp:term-source><ncicp:source-code>some code</ncicp:source-code> </ncicp:ComplexTerm>

If no source code is required the entire set of tags can be eliminated from the above.  

Behavior To Be Aware Of

GF22902 and

GF26478 


 

List of New Features

GForge number
(hyperlinked)

Brief description of item

 

 

 

 

List of Bug Fixes


GForge number
(hyperlinked)

Brief description of item

23517

ChAO is slow working with over 57000 changes

26154

Performance does not seem to be as robust as it was in UAT

26131

NIH user name is displayed in slot of DEFINITION

 

 

 

 

 

 


Other Items Closed


The defects in the following list were not reproducible, or were fixed as a by-product of refactoring, or were related to configuration setup.

GForge number
(hyperlinked)

Brief description of item

 

 

 

 

 

 


CORE Product Dependencies

No caCORE dependencies. This software is used for editing and maintaining NCI Thesaurus and BiomedGT

Release History

Release

Date

1.0

Jun 07

1.1

Sept 07

1.2.0

Dec 07

1.2.1

Feb 08

1.2.2

May 08

1.2.3

Jul 08

1.2.3 Patch

Aug 08

1.3.0

Mar 09

1.4.0

Sep 09

1.4.1

Jan 10

1.4.1 Patch

Feb 10

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