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 Definition of project

The goal of this project is to create a survey of Publicly Available InVivo Medical Imaging Archives and the underlying software capabilities. It is generally agreed that there is a need for public medical imaging archives to provide the biomedical research community, industry, and academia with access to images that support:

  • Lesion detection and classification
  • Accelerated diagnostic imaging decision
  • Quantitative imaging assessment of drug response

The purpose of this project is to provide a practical guide for the community which allows them to assess existing software and instantiations that are appropriate to their research or clinical needs.

Publicly Hosted Biomedical Imaging Archives

 

NCI's NBIA node

Central XNAT

NIST

LONI

OsteoArthritis-OAI

NDAR

Give A Scan

NA-MIC

Pediatric MRI Data Repository

EORTC

Sponsor(s)

Cancer Imaging Program, caBIG

 

 

 

 

 

 

 

 

 

Archive Software

NBIA

 

 

 

 

 

 

 

 

 

Supported Operating Systems

Linux, Mac?, Windows?

 

 

 

 

 

 

 

 

 

Active development Team/Community

Yes

 

 

 

 

 

 

 

 

 

Central curation/review

Yes

 

 

 

 

 

 

 

 

 

Explicit data sharing policy (link)

Yes

 

 

 

 

 

 

 

 

Yes

Availability/Uptime

99%?

 

 

 

 

 

 

 

 

 

Submission Technology

CTP

 

 

 

 

 

 

 

 

 

Standard of De-Identification

Supplement 142 w/ Keep Description, Retain Device Info options enabled

 

 

 

 

 

 

 

 

 

Support for multi-site submissions

Yes

 

 

 

 

 

 

 

 

 

Project- or collection- based groupings?

 

 

 

 

 

 

 

 

 

 

Size of Current Volume

~3TB

 

 

 

 

 

 

 

 

None

Federated implementation

Yes

 

 

 

 

 

 

 

 

 

Public API

Yes

 

 

 

 

 

 

 


 

number of DICOM Tags query-able

~90?

 

 

 

 

 

 

 

 

 

DICOM transfer protocol

For submission, but not download

 

 

 

 

 

 

 

 

 

methods to download DICOM data

Web, FTP, Java Webstart client

 

 

 

 

 

 

 

 

 

Central XNAT

http://central.xnat.org/app/template/Login.vm

http://central.xnat.org/

LONI

http://www.loni.ucla.edu/ADNI/

https://ida.loni.ucla.edu/login.jsp?project=ADNI

https://ida.loni.ucla.edu/services/Menu/IdaData.jsp?project=ADNI

NAMIC

NAMIC Image Gallery: http://www.na-mic.org/publications/gallery

Lung Cancer Alliance: Give A Scan

http://www.giveascan.org/

NDAR

http://ndar.nih.gov/ndarpublicweb/aboutNDAR.go

Pediatric MRI Data Repository

https://nihpd.crbs.ucsd.edu/nihpd/info/data_access.html

NIH Image Bank

http://media.nih.gov/imagebank/index.aspx

EORTC

  http://www.eortc.be/services/forms/erp/default.aspx

EORTC TUMOR BANK (pathology)

Image archive software solutions

 

NBIA

XNAT

NIST

OpenPacs

DCM4CHEE

 

Interface/GUI

Web

Web

 

 

 

 

Query flexibility

 

 

 

 

 

 

Role Based Security

Yes

 

 

 

 

 

Public access option

Yes

 

 

 

 

 

Active Development


 

 

 

 

 

Supports Federated Implementation

Yes

 

 

 

 

 

API available

 

 

 

 

 

 

Supported image formats

 

 

 

 

 

 

Supported metadata formats

 

 

 

 

 

 

Helpdesk support

 

 

 

 

 

 

Transfer protocols (import/export)

 

 

 

 

 

 

Controlled Vocabulary

 

 

 

 

 

 

Deployment Support

 

 

 

 

 

 

NBIA

https://gforge.nci.nih.gov/frs/?group_id=312

Xnat

http://www.xnat.org/
http://www.xnat.org/2010+XNAT+Workshop+Agenda

OpenPacs

http://www.mii.ucla.edu/index.php/MainSite:OpenSourcePacsDocumentationImageServer

DCM4CHEE

http://www.dcm4che.org/confluence/display/ee2/Home

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