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  1. Integrated Azure's Kubernetes \ Storage \ Networks \ VM pools \ and Docker Registry pieces with CodaLab with the help from Patrick Flickinger. 
    UPDATE: Ingress and cert-manager are working properly now. We are working to get the challenge upload process to work seamlessly. Seems CodaLab is prepending some links and routes with https instead of http and the normal work flow is interrupted. Patrick is working on a fix.
  2. We did indeed move to a GPU resource pool. I also increased our limits for VMs in East-US and East-US2 to make sure there is enough availability.
  3. All participant dockers have been run an backed up.
  4. A new docker submission video (tutorial) has been made and Carolyn is making edits to it.
  5. Reminded Jayashree to send invoices for July\Aug and Sept (new contract).
Planned for next month
  1. Get PIV card for NIH access.
  2. Create image registry submission for internal COVID challenge.
  3. Add Okta as supported feature in MedICI github and website.
  4. Meet with Ulli, Keyvan and Jayashree to discuss new contract.
Comments

Things that went well:

  • The internal COVID challenge is having some difficulties but it is clear we are moving forward.
Comments

Things that could be improved:

  • As far as the new infrastructure is concerned, better documentation would really help. There will be a huge need to collect what "worked" when this is completed. (same from last month)



MeetingDate
Bi-weekly Meeting #1

 

Bi-weekly Meeting #2

 

Bi-weekly Meeting #e

Milestones

DescriptionDate

 

Task

DescriptionResolutionStatusCreation DateClose Date

Get sample pneumonia algorithm running on Azure VM

Need to increase quotacomplete

 

 

Get pools of VMs in Azure integration to be based on GPU machines


Depends on above taskpending

 

 

Risks

DescriptionMitigationRankStatusCreation DateRealizationClose Date
If we can't get GPU machines hooked up to Kebernetes in Azure then we can't run algorithmsExecute above tasks and get help from Patrick and or Azure support team--closed

 

We needed to request additional access to GPU machines through the Azure service portal

 

Ingress service in kubernetes is not behaving like the standard tutorials or documentationKeep plugging away to find the correct configuration1open

 

Azure has inconsistent docs on how to set this service up.--
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