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Activities completed this month

  • MIDRC - Challenge1 planning is starting. We received the new data and are prepping the annotation app for receiving images. This is a COVID detection challenge and we are using chest X-RAYs. Further analysis is needed to determine the images we will use.
  • CodaLab (Open Source Team):
  • Federated learning challenge:

    • UPDATE: This is done. All is integrated.
    • UPDATE: Done
    • Participants were instructed to use the actual challenge site located here: https://breastdensityfl.acr.org/competitions/1.
    • Submissions are automated in general but there are hiccups that we deal with manually. I spend about 3 hours a day on this and it eats a lot of time as the platform isn’t exactly stable. The submissions sometimes fail and we don’t know why and I have to manually change their status to pass in the database and created the detailed results that were supposed to be created. I can hack the system to do what I need but it is taking up a lot of time. We need to consider a more stable platform for the future.
    • Development is ongoing regarding integrating the scoring program and finishing the FL workflow automation.
    • Finish docker upload email notification. 
Planned for next month
  • Federated Learning Challenge: 
    • Challenge will end next month and we need to send some emails to participants reminding them that the queue is getting longer by the day and that a week before the challenge ends, there may not be time for new submissions to run. We need to tell them to queue their best submission before Aug 31st.
  • CodaLab (Open Source Team): 
    • Continue working on GPU submissions with the compute worker.
    • Potentially test other challenges we have run.
    • Help get automated tests to pass maybe…stretch goal honestly.
    • Check in any code changes as needed to fix issues found.
  • Discuss Milo Fryling’s request to run another challenge. Direct him to the google form.
    • Jayashree is opposed but I think we should consider testing out a challenge on the new codabench platform.
  • MIDRC:
    • Data analysis needs to be done to identify cases we can use for challenge…ongoing.
MeetingDate
Bi-weekly Meeting #1

 

Bi-weekly Meeting #2

 



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