Example Files:
This page provides examples for the ISA-TAB-Nano Investigation files, leveraging data from the Nanotechnology Characterization Laboratory (NCL) as an example (NCL200612A).
TABLE 1. ISA-TAB-Nano Investigation File Extensions to ISA-TAB
Section |
Field |
Field Status (if applicable) |
|---|---|---|
INVESTIGATION |
Investigation disease |
Required |
INVESTIGATION |
Investigation disease term accession number |
Required |
INVESTIGATION |
Investigation disease term source REF |
Required |
INVESTIGATION |
Investigation outcome |
Optional |
STUDY |
Study disease |
Required |
STUDY |
Study disease term accession number |
Required |
STUDY |
Study disease term source REF |
Required |
STUDY |
Study outcome |
Optional |
STUDY ASSAYS |
Study assay measurement name |
Required |
STUDY ASSAYS |
Study assay measurement name term accession number |
Required |
STUDY ASSAYS |
Study assay measurement name term source REF |
Required |
Ontology Source Reference
TABLE 2: Example Investigation File Ontology Source Reference Section
Investigation
TABLE 3: Example Investigation File Investigation Section
Investigation Contacts
TABLE 4: Example Investigation File Investigation Contacts Section
Investigation Publication
TABLE 5. Example Investigation Publication Section
Study
TABLE 6. Example Investigation File Study Section
Study Design Descriptors
TABLE 7. Example Investigation File Study Design Descriptors Section
Study Contacts
TABLE 8. Example Investigation File Study Contacts Section
Study Publications
TABLE 9. Example Investigation File Study Publications Section
Study Assays
TABLE 10. Example Investigation File Study Assays Section
Study Factors
TABLE 11. Example Investigation File Study Factors Section
Study Protocols
TABLE 12. Example Investigation File Study Protocols Section
