DOWNLOAD NCI CELL LINE DATA

BACKGROUND

The NCI cell line screen

The public NSC compounds

The NCI cell lines

FILES FOR DOWNLOAD January 2023 Release

Previous Releases.


DATA FILE SIZEDOWNLOAD SIZELINK
CONCENTRATION/RESPONSE DATA2.25 Gb305 MbDOSERESP.zip
GI50 DATA381 Mb35 MbGI50.zip
TGI DATA376 Mb31 MbTGI.zip
LC50 DATA372 Mb28 MbLC50.zip
IC50 DATA381 Mb33 MbIC50.zip
ONECONC (PRESCREEN) DATA377 Mb42 MbONECONC.zip

GENERAL COMMENTS REGARDING THE DOWNLOADABLE FILES

FILE COLUMN HEADERS

CONCENTRATION/RESPONSE DATA

  1. RELEASE_DATE The date of this data release.
  2. EXPID Please see the General Comments above.
  3. PREFIX The identifier of the sequence from which an NSC number was assigned. All public data are in the S series.
  4. NSC The numeric identifier in the S series.
  5. CONCENTRATION_UNIT Please see the General Comments above.
  6. LOG_HI_CONCENTRATION The log10 of the highest concentration of the concentration/response data.
  7. CONCENTRATION The log10 of the concentration in the dilution series.
  8. PANEL_NUMBER Internal identifier. The combinations of panel_number and cell_number are unique cell line identifiers.
  9. CELL_NUMBER Internal identifier. The combinations of panel_number and cell_number are unique cell line identifiers.
  10. PANEL_NAME The name of the NCI cell line panel (cancer type).
  11. CELL_NAME The name of the NCI cell line.
  12. PANEL_CODE An abbreviation for the panel_name.
  13. COUNT_GIPRCNT Count of GIPRCNT values.
  14. AVERAGE_GIPRCNT Average of GIPRCNT values.
  15. STDDEV_GIPRCNT Standard deviation of GIPRCNT values.
  16. COUNT_PTC Count of PTC values.
  17. AVERAGE_PTC Average of PTC values.
  18. STDDEV_PTC Standard deviation of PTC values.

GI50, TGI, LC50, IC50 VALUES

  1. RELEASE_DATE The date of this data release.
  2. EXPID Please see the General Comments above.
  3. PREFIX The identifier of the sequence from which an NSC number was assigned. All public data are in the S series.
  4. NSC The numeric identifier in the S series.
  5. CONCENTRATION_UNIT Please see the General Comments above.
  6. LOG_HI_CONCENTRATION The log10 of the highest concentration of the concentration/response data.
  7. PANEL_NUMBER Internal identifier. The combinations of panel_number and cell_number are unique cell line identifiers.
  8. CELL_NUMBER Internal identifier. The combinations of panel_number and cell_number are unique cell line identifiers.
  9. PANEL_NAME The name of the NCI cell line panel (cancer type).
  10. CELL_NAME The name of the NCI cell line.
  11. PANEL_CODE An abbreviation for the panel_name.
  12. COUNT Count of interpolated values.
  13. AVERAGE Average of interpolated values.
  14. STDDEV Standard deviation of interpolated values.

ONECONC (PRESCREEN) DATA

  1. RELEASE_DATE The date of this data release.
  2. EXPID Please see the General Comments above.
  3. PREFIX The identifier of the sequence from which an NSC number was assigned. All public data are in the S series.
  4. NSC The numeric identifier in the S series.
  5. CONCENTRATION_UNIT Please see the General Comments above.
  6. CONCENTRATION The concentration in the pre-screen assay.
  7. PANEL_NUMBER Internal identifier. The combinations of panel_number and cell_number are unique cell line identifiers.
  8. CELL_NUMBER Internal identifier. The combinations of panel_number and cell_number are unique cell line identifiers.
  9. PANEL_NAME The name of the NCI cell line panel (cancer type).
  10. CELL_NAME The name of the NCI cell line.
  11. PANEL_CODE An abbreviation for the panel_name.
  12. COUNT_GIPRCNT Count of GIPRCNT values.
  13. AVERAGE_GIPRCNT Average of GIPRCNT values.
  14. STDDEV_GIPRCNT Standard deviation of GIPRCNT values.

Cancelled Experiments

The following files contain data that were cancelled by the laboratory due to quality control issues.


CSV FILE LINK
CONCENTRATION/RESPONSE DATADOSERESP_Cancelled.csv

GI50 DATA 

GI50_Cancelled.csv

TGI DATA 

TGI_Cancelled.csv

LC50 DATA 

LC50_Cancelled.csv

IC50 DATA 

IC50_Cancelled.csv

ONECONC (PRESCREEN) DATA

ONECONC_Cancelled.csv

The cancelled data were removed from the December 2022 Release files listed above.