This chapter introduces you to how to review and make pending data public and how to submit batch processes. Topics in this chapter include:
If a user is not a curator and wants a protocol, sample, or publication that they own to be publicly-accessible, the user must submit it to a data curator for review. A data curator reviews the item, and when satisfied, changes it to Public access.
To review the data pending release to the public
To generate or remove data availability for multiple samples in a batch
The owner of a sample can always generate data availability metrics for the individual sample, as described in Generating Data Availability Metrics. |
On Manage Curation, click Manage Batch Data Availability. The Manage Batch Data Availability page opens. The following sample data availability batch options are available.
This batch process may take some time, but it runs in the background, so you can perform other options in caNanoLab. |
Option | Description |
---|---|
Generate data availability for all samples | Generates data availability metrics for all samples, including those where metrics were generated previously. |
Regenerate data availability of sample with existing availability | Generates data availability metrics only for samples where metrics were generated previously. |
Delete data availability for all samples | Removes all the current data availability metrics for all samples. |
Click Submit. A message appears. For example: "It will take a while to generate data availability metrics for 1753 samples."
The batch generation runs in the background, so you can leave this page and continue using caNanoLab. |
If you run a data metrics batch job from the Curation menu, you may be generating or removing metrics from many samples. This may take some time.