LexEVS Meeting Minutes - 2024.07.17

Agenda

EVS Discussion

Open System Tickets

Ticket	Description	Actions, Update
	Tomcat 9 QA setup complete?	NCIt, NCIm. CTS2?

	LEXEVS UPDATES
EVS transition to virtual machines	STATUS: Tomcat 8.5 reached EoL - needing new stacks for all tiers Oracles OES8, Tomcat 10, Java 17 Java 17 implemented Others to follow once 17 on Pro NCItermform installed on Dev - going to QA Tomcat 9 installed on QA Getting issues when pointing Apache to new tomcat Deployment tracks being implemented check status

Monthly Planning and Focus	Completed Sprint - Sprint 220 (May 13 - May 31) - Current Sprint - Sprint 221 (June 07 - July 08) - For the month of June 2024 Report Exporter EVSREPEXP-509 Add file template functionality EVSREPEXP-510 Update to Tomcat 9 EVSREPEXP-515 Test new Tomcat 9 Java 17 Report Exporter site EVSREPEXP-516 Test Report Exporter QA after Java 17 Improvements, Refactoring Code Debt, Feature development: LEXEVSCTS2-431 Service Resource does not promote Service name/version LEXEVS-5378 Document OWLKb Implementation of Java 17 CTS2FW-150 Update to Tomcat 9 NCIM-304 Update NCI Metathesaurus Browser to Java 17 DataDog LEXEVS-5368 Review Query Results EVSSTATS-97 Implement Reports EVSSTATS-50 Test archived log ingest work flow EVSSTATS-64 Determine how to ingest older logs for all EVSApps EVSSTATS-98 Query migration - Sumo Logic to DataDog EVSSTATS-99 Dashboard migration - Sumo Logic to DataDog
Report Exporter	Working on templating starting Doing phase 1 - moved to Stage Stage EVS Rest API having issues Cloud team addressing the issue Held working session with systems but unsuccessful In progress: implement file-based template storage Code completed - responding to Unit tests
Security	Tomcat 8.5 is EOL - risk if new vulnerability discovered Oracle Java 8 - still being used on DataQA Still present on other servers, in $PATH Java 17 being added next week Current proposal is to not push to DataQA, let it retire Need to check on Processing Server FTP1 has .bash_history issue - file removed but recreated itself
Statistics Dashboard	OBJECTIVE Build scheduled report - Discovered not available on gov cloud. Will need to come up with operational procedure Manish will follow up with DataDog Data dropping off after 30 days. STATUS All May logs loaded from Sumo Fixing malformed logs
Comparison/Mapping Tool	Request put in for retirement - Systems working on this
Team Absences	Mayo Team - Andrew off Jul 10, Scott working remotely Aug 1-10 MSC - Leidos - Chao July 4-July 22nd QA - Gov -
	EVS SERVICE AND ARCHITECTURE GROUP UPDATES
EVS Service and Architecture Group
LexEVS Retirement	Documentation is in SharePoint: EVS Documentation > LexEVS Documentation > Sunsetting LexEVS (link) Setting up Jira tracker for retirement work - SUNSET https://tracker.nci.nih.gov/projects/SUNSET/issues/SUNSET-4?filter=allopenissues Involve Systems in forwarding of links Deadline Dec 31, 2024
	DATA UPDATES
Data	Chao out so unable to report
	BROWSER UPDATES
Browser	NCIm browser being hit hard this week. Pegged CPU and affected both NCIm and NCIt
	QA UPDATES
QA	Completed June 24 monthly data testing Working on 1.10 on EVS RestAPI and EVS Explore
	TERMINOLOGIES LIFECYCLE REPORT
	Terminology Updates and Schedule
Mark Benson TPM Update	Call for people to complete their required trainings. Security Implicit bias

Vocabularies Slated for Production

Terminology Updates and Schedule

Vocabulary Name	Local Name	Version	Arrival Date	Loaded to data-qa DB	Date to Stage	Date to Production
Vocabulary Name in LexBIG	Short Name	Version identifier	Date the vocabulary arrived for processing	Has the vocabulary been loaded to the data-qa database?	Approximate date the vocabulary version is scheduled to move to staging	Approximate date the vocabulary version is scheduled to move to production
NCI Thesaurus	NCIt	24.02d	02/27/2024	yes	03/05/24	03/09/24
NCIt-HGNC	NCIt-HGNC	Feb2024	02/27/2024	yes	03/05/24	03/09/24
SwissProt	SwissProt	Feb2024	02/27/2024	yes	03/05/24	03/09/24
CanMed	CanMed	Feb2024	03/09/24	yes	03/12/24	03/17/24
ChEBI	ChEBI	v231	03/09/24	yes	03/12/24	03/17/24
HGNC	HGNC	Mar2024	03/09/24	yes	03/12/24	03/17/24

QA Schedule and Status

see QA Scheduling and Status

SECTION FOR FUNCTIONAL SYSTEM TESTING STATUS ::

Application and Version	Percentage Complete	Estimated Completion Date per Iteration	Priority Level	Type Of Testing	Current Tier for Release (DEV, QA, Stage, Prod)	Expected Production Date
EVS REST API (v1.6)	100%	5/27/2022	High	Progression + Regression	QA	6/6/2022
EVS Explore (v1.6)	100%	5/27/2022	High	Progression + Regression	QA	6/6/2022
EVS REST API(v1.6)	100%	6/1/2022	High	Regression	Stage	6/6/2022
EVS Explore(v1.6)	100%	6/2/2022	High	Regression	Stage	6/7/2022
EVS REST API(22.05e) - Monthly Data Deployment	100%	6/1/2022	High	Regression	Stage	6/3/2022
EVS REST API(22.05e) - Monthly Data Deployment	100%	6/3/2022	High	Regression	Production	6/3/2022
EVS REST API(v1.6)	100%	6/6/2022	High	Regression	Production	6/6/2022
EVS Explore(v1.6)	100%	6/7/2022	High	Regression	Production	6/7/2022
NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)	100%	6/3/2022	High	Regression	Stage	6/6/2022
NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)	100%	6/6/2022	High	Regression	Production	6/8/2022
EVS REST API(22.06d) - Monthly Data Deployment	100%	6/30/2022	High	Regression	Stage , Production	6/30/2022
NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment	100%	7/8/2022	High	Smoke	Stage,Production	7/8/2022
NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)	100%	6/3/2022	High	Regression	Stage	6/6/2022
NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment	100%	7/8/2022	High	Smoke	Stage,Production	7/8/2022
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment)	100%	7/12/2022	High	Smoke	Stage	7/12/2022
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment)	100%	7/13/2022	High	Smoke	Production	7/13/2022
EVS REST API(22.07d) - Monthly Data Deployment	100%	7/27/2022	High	Regression	Stage , Production	7/27/2022
NCIt,NCIm,TermForm(22.07d) - Monthly Data Deployment	100%	8/1/2022	High	Smoke	Stage,Production	8/1/2022
NCIt,NCIm,TermForm(CanMED, GO & HGNC AUG 2022 Deployment)	100%	8/3/2022	High	Smoke	Stage,Production	8/3/2022
EVS REST API - 1.6.1 (Hot Fix Deployment)	100 %	8/3/2022	Highest	Progression + Regression	Stage,Production	8/4/2022

Attendees

Name	Role	Present
Remennik, Lyubov	NIH/NCI
Safran, Tracy	NIH/NCI [C]
Ong, Kim L	NIH/NCI [C]
Lucas, Jason R	NIH/NCI [C]
Bauer, Scott	NIH/NCI [C]
Alkis, Barry	NIH/NCI [C]	<checked in>
Solie, Chuck	NIH/NCI [C]
Kondareddy, Swathi	NIH/NCI [C]
Singh, Itendra	NIH/NCI [C]
Zhang, Chao	NIH/NCI [C]
Johnson, Connie	NIH/NCI [C]
Whiteman, Lori	NIH/NCI [C]
Benson, Mark	NIH/NCI [C]
Andrew Moore	NIH/NCI [C]

JIRA Issues

Recent EVS Stats Dashboard Related Bugs and Features

Key	Summary	T	Created	Reporter	P	Status

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Recent Report Exporter Related Bugs and Features

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Key	Summary	T	Created	Reporter	P	Status

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Recent LexEVS Related Bugs and Features

Key	Summary	T	Created	Reporter	P	Status

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Recent CTS2 Service Related Issues

Key	Summary	T	Created	Updated	Due	Assignee	Reporter	P	Status	Resolution

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ASSIGNED ACTION ITEMS

Description	Due date	Assignee	Task appears on
Benson, Mark (NIH/NCI) [C] to follow-up with Systems if no meeting is scheduled by 09 Oct 2023 - on this ticket; also note	09 Oct 2023	Benson, Mark (NIH/NCI) [C]	LexEVS Meeting Minutes - 2023.10.25
Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on 11 Oct 2023	11 Oct 2023	Benson, Mark (NIH/NCI) [C]	LexEVS Meeting Minutes - 2023.10.25
Benson, Mark (NIH/NCI) [C] to report on info found out from OCPL on 11 Oct 2023	11 Oct 2023	Benson, Mark (NIH/NCI) [C]	LexEVS Meeting Minutes - 2023.10.25
Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on 11 Oct 2023	11 Oct 2023	Benson, Mark (NIH/NCI) [C]	LexEVS Meeting Minutes - 2023.10.18
Benson, Mark (NIH/NCI) [C] to report on info found out from OCPL on 11 Oct 2023	11 Oct 2023	Benson, Mark (NIH/NCI) [C]	LexEVS Meeting Minutes - 2023.10.18
Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on 11 Oct 2023	11 Oct 2023	Benson, Mark (NIH/NCI) [C]	LexEVS Meeting Minutes - 2023.10.11
Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on 11 Oct 2023	11 Oct 2023	Benson, Mark (NIH/NCI) [C]	LexEVS Meeting Minutes - 2023.10.04
Tracy to send invite to systems to discuss migration in this meeting			LexEVS Meeting Minutes - 2024.07.17
Temporarily block Singapore traffic			LexEVS Meeting Minutes - 2024.06.05
Tracy to request shut down of instance to save resources			LexEVS Meeting Minutes - 2024.06.05
Temporarily block Singapore traffic			LexEVS Meeting Minutes - 2024.05.29
Tracy to request shut down			LexEVS Meeting Minutes - 2024.05.29
Check status of termform and Tomcat9			LexEVS Meeting Minutes - 2024.05.15
Meeting scheduled Thursday for Visual VM			LexEVS Meeting Minutes - 2024.05.15
Schedule followup meeting			LexEVS Meeting Minutes - 2024.04.03
Tracy to check with team			LexEVS Meeting Minutes - 2024.03.27
will need additional work to install Datadog / AWS integration. working with Cyrus and Systems.			LexEVS Meeting Minutes - 2024.02.21
will need additional work to install Datadog / AWS integration. working with Cyrus and Systems.			LexEVS Meeting Minutes - 2024.02.14
Benson, Mark (NIH/NCI) [C] to create S3 bucket - under 'EVSTOOLS'		Benson, Mark (NIH/NCI) [C]	LexEVS Meeting Minutes - 2024.02.07
Short meeting to determine audience for app			LexEVS Meeting Minutes - 2024.02.07

Content

Space Tools

Agenda

EVS Discussion

Vocabularies Slated for Production

QA Schedule and Status

Attendees

JIRA Issues

Recent EVS Stats Dashboard Related Bugs and Features

Recent Report Exporter Related Bugs and Features

Recent LexEVS Related Bugs and Features

Recent CTS2 Service Related Issues