NIH | National Cancer Institute | NCI Wiki  

  • Created by Unknown User (stanclcr2), last modified on Dec 09, 2015
Document Information

Author:  Craig Stancl, Scott Bauer, Cory Endle
Email:  Stancl.craig@mayo.edu, bauer.scott@mayo.edu, endle.cory@mayo.edu
Team:  LexEVS
Contract:   S13-500 MOD4
Client:  NCI CBIIT
National Institutes of Heath
US Department of Health and Human Services

Contents of this Page

The purpose of this document is to document the technical face to face meeting details between the NCI and Mayo for the National Cancer Institute Center for Biomedical Informatics and Information Technology (NCI CBIIT) LexEVS Release 6.3 and LexEVS Release 6.4 .

December Face-to-Face (December 8 - 10, 2015)

Meeting Details

NCI Shady Grove Campus
9609 Medical Center Drive
Rockville, MD 20850
http://www.cancer.gov/about-nci/visit

Rooms:

Day 1  (8-1): 08-Dec-2015 08:00 AM - 01:00 PM  1W030
Day 1  (1-5): 08-Dec-2015 01:00 PM - 05:00 PM  4W030

Day 2       : 09-Dec-2015 08:00 AM - 05:00 PM  2E914

Day 3 (8-12): 10-Dec-2015 08:00 AM - 12:00 PM  6E030
Day 3 (12-5): 10-Dec-2015 12:00 PM - 05:00 PM  1W030

Conference Details
 1-866-660-5416 # 2398515  
 

WebEx by Day:

Topic: Mayo-NCI EVS F2F Day 1 (Monday)
Date and Time:
Tuesday, December 8, 2015 8:00 am, Eastern Standard Time (New York, GMT-05:00)
Event number: 315 782 024
Event password: 4NCI-new
Panelist password: The Event has no Panelist Password
Host key: 317579 (Use this to reclaim host privileges.)
Event address for attendees: https://cbiit.webex.com/cbiit/onstage/g.php?d=315782024&t=a
Event address for panelists: https://cbiit.webex.com/cbiit/onstage/g.php?d=315782024&t=p

Topic: Mayo-NCI EVS F2F Day 2 (Tuesday)
Date and Time:
Wednesday, December 9, 2015 8:00 am, Eastern Standard Time (New York, GMT-05:00)
Event number: 318 104 865
Event password: 4NCI-new
Panelist password: The Event has no Panelist Password
Host key: 149718 (Use this to reclaim host privileges.)
Event address for attendees: https://cbiit.webex.com/cbiit/onstage/g.php?d=318104865&t=a
Event address for panelists: https://cbiit.webex.com/cbiit/onstage/g.php?d=318104865&t=p

Topic: Mayo-NCI EVS F2F Day 3 (Wednesday)
Date and Time:
Thursday, December 10, 2015 8:00 am, Eastern Standard Time (New York, GMT-05:00)
Event number: 313 684 532
Event password: 4NCI-new
Panelist password: The Event has no Panelist Password
Host key: 914157 (Use this to reclaim host privileges.)
Event address for attendees: https://cbiit.webex.com/cbiit/onstage/g.php?d=313684532&t=a
Event address for panelists: https://cbiit.webex.com/cbiit/onstage/g.php?d=313684532&t=p


Attendees

NameRoleAttend? (Y/N)

Wright, Larry

NIH/NCI  

Y

Fragoso, Gilberto

NIH/NCI    

Y

De Coronado, Sherri    

NIH/NCI   

Y

Safran, Tracy

NIH/NCI   

Y

Ong, Kim L

IS

Y

Lucas, Jason R

IS

Y

Bauer, Scott  

Mayo

Y

Stancl, Craig

Mayo

Y

Endle,  Cory

Mayo

Y 

Wynne, Robert    

NIH/NCI

Y

Tran, Tin    

NIH/NCI [C]

Y

Carlsen, Brian

(NIH/NCI) [C]

 

Wong, Joanne 

  

Kuntipuram, Kumar

  

Meeting Notes

2015.12 Technical Face-To-Face Meeting Notes

2015.12 Technical Face-To-Face Prioritization List

Agenda

 

  

Tuesday, December 8

  
TimeLocationTopicsParticipantsResources
9:00 AM - 9:30 AM

1W030

Overview and Planning  
9:30 AM - Noon

1W030

Discussion: Tech Stack Updates

  • Migration to Java 8
  • Migration to centOS 7
  • Migration to Spring 4
  • Determine next steps/roadmap
 2015.12 - NCI F2F - Tech Stack.pptx
  

Discussion: LEXEVS API/Browser Performance and Usability Improvements

  • NCI to provide requirements/use cases
  • Areas for discussion:
    • value set
    • mapping 
    • multi-namespace
    • relationship querying
    • inferred data
  • Discuss the removal of caCORE and refactor Remote API
  • Determine next steps/roadmap
 2015.12 - NCI F2F - LEXEVS API:Browser Performance and Usability Improvements.pptx
Noon - 1:00 PM LunchAll 
1:00 PM - 2:00 PM

4W030

Discussion: Enhancing the LEXEVS CTS2 REST Interface

  • NCI to provide requirements/use cases
  • Areas for discussion:
    • Expanding to include Associations
    • Specialized REST calls (e.g., bulk download) to CTS2 service framework
    • Provide the capability to use data from one endpoint to query another
    • Provide a framework that includes both CTS2 and Extensions
    • Bulk downloads/special user requirements
  • Determine next steps/roadmap
 2015.12 - NCI F2F - CTS2 API Notes.pptx
 2:00 PM - 4:00 PM

4W030

Information Session: Using LexEVS Query API and CTS2 API

  • Overview to demonstrate how to query using LexEVS APIs
  • Review of existing LexEVS API documentation
  • Open discussion - specific use cases
 2015.12 - NCI F2F - Using LexEVS Query API and CTS2 API .pptx
4:00 PM - 5:00 PM4W030Overflow/Additional Topics  
  

Wednesday, December 9

  
TimeLocationTopicsParticipantsResources
8:00 AM - 9:00 AM2E914Discussion: Review Lucene

Kim Ong
Scott Bauer 

 
9:00 AM - 9:30 AM

2E914

Recap and Planning  
9:30AM - Noon

2E914

Discussion: Coding Scheme Search and Indexing

  • Determine requirements/use cases for horizontal coding scheme searches
  • Overview of indexing of qualifiers
  • Overview of search results in 6.4
 2015.12 - NCI F2F - Coding Scheme Search and Indexing.pptx
  

Discussion: LEXEVS Loader Improvements

  • Discuss known issues for OWL2, MedDRA and HL7 Loaders
  • Other loader improvements
  • Determine next steps/roadmap
 2015.12 - NCI F2F - LexEVS Loader Improvements.pptx
Noon - 1:00 PM LunchAll 
1:00 PM - 1:30 PM2E914

EVS Tools (LexEVS & EVS Focus) Meeting

  • Open topics
  
1:30 PM - 4:00 PM

2E914

Tutorial/Discussion: Loader Implementation and Requirements

  • Overview of LexEVS Loader development process
  • Implement a simple LexEVS loader (hands-on)
  • Discussion of entry points into various loaders for purposes of updating
  • Discuss automating data loads and customization 

Tracy
Rob
Kim 

 

2015.12 - NCI F2F - Loader Tutorial.pptx

2015.12 - NCI F2F - Tutorial Env Set Up.pptx

4:00 PM - 5:00 PM2E914Overflow/Additional Topics  
  

Thursday, December 10

  
TimeLocationTopicsParticipantsResources
9:00 AM - 9:30 AM

6E030

Recap and Planning  
9:30 AM - Noon

6E030

Discussion: Triple Store/Graph Database

 2015.12 - NCI F2F - Triple Store:Graph Database.pptx
  

Discussion: Cloud Considerations

  • NCI to provide requirements/use cases for supporting a cloud environment
 2015.12 - NCI F2F - Cloud Considerations.pptx
  

Discussion: Build and Deployment Process

  • DevOps and continuous integration
  • Changes for build, deployment and distribution
    • Changes to support 6.4
    • Considerations for Triple Store/Graph DB
    • Considerations for Cloud Infrastructure
  • Mayo's continuous integration server
  • Demo of Docker
  • Determine next steps/roadmap
 2015.12 - NCI F2F - Build and Deployment Process.pptx
Noon - 1:00 PM LunchAll 
1:00 PM - 3:00 PM

1W030

Discussion: Value Set Editor (Authoring)

  • NCI to provide requirements/use cases
 2015.12 - NCI F2F - Value Set Editor.pptx
 

 

Discussion: The Future of lbGUI

  • Discuss future requirements
  • Review issues - JIRA and others
  • Develop a roadmap to address technical debt
  • Determine next steps/roadmap
 2015.12 - NCI F2F - lbGUI.pptx
3:00 PM - 5:00 PM

1W030

Debrief

  • Prioritize
  • Determine next steps/roadmap
  

 

 

 

 

 

 

 

 

  • No labels