NIH | National Cancer Institute | NCI Wiki  

Agenda

EVS Discussion

Open System Tickets

Ticket Description Actions, Update
Request from LRbanner referencing EVS Explorer

If NCI Terms Browser down, banner should point people to EVS Explorer.

Will be in current tag, on QA

NCI-RITM0497500Planning Discussion with Systems about migrating to Java 17
  • Meeting Fri, Jan19 11AM
  • Tomcat 8.5 EoL this year
  • ecj is Tomcat8 jar and needs updated to work with Java 17. 
  • Shiv Kadarthi overseeing the OS/Tomcat upgrade.
  • Java 17 installed on Dev
  • Scott working with Systems to get JConsole on Dev
NCI-RITM0499380 add jconsole access on PROD to debug performance issues

Posted latest access errors to ticket, trying to get needed access.

Per Jason - has been bumped up to engineering team


MEME URI not working, hostname usable as workaround

Vansi asked if it was still broken and will work on it

Lori to reach out to Brian

Collaborate migrationCollaborate ending in February

Any issues impacting us?  No EVS documents

GDC-MVS has been migrated to Sharepoint

NCI-CHG0018566 - jconsole permissions on the EVS DEV Server nciws-d2002-v

Need install/access by developers


SYSTEMS
EVS transition to virtual machines

STATUS: We are waiting to switch STAGE from on prem to VM once PROD server is ready; so we can switch both PROD and STAGE at same time . 

  • New rules from Systems Engineering has resulted in additional documentation and testing.
  • Jenkins setup created, still adjusting it.



LEXEVS UPDATES

Monthly Planning and Focus

Completed Sprint - Sprint 216 (Jan 9 - Feb 2) -

Current Sprint  - Sprint 217 (Feb 2 - Mar 2) - Sprint 217

For the month of February 2024

  • Tracy to update this section
Technical Debt remediation

LexEVS Code Debt Refactoring

  • Coding complete on lexevs services - except for isolated dependencies
    • Java 17 work ready for NCit Browser 
  • CTS2 - Working to update Jakarta - linked to Java17
  • Dependabot notice to update jQuery - ready for Dev


OS Updates
  • Mark reached out to Krish, Eric Williams and are waiting to hear back.
  • Jason provided list of AWS hosts (24 hosts on AWS need to move to new Amazon Linux 23)
  • Mark to reach out by Friday if we don't hear back
Report Exporter
  • Banner changes being implemented 
    • for on cloud → will be using CBIIT's injection
    • for on-prem → will be using our own implementation
  • Working on templating - Need user feedback for phase 2
    • Demo feedback implemented
    • Need to make more dynamic - load values from external source - work started
    • Will need feedback from users to provide template requirements
  • Wait time indicator work is ready for testing
  • Mark to schedule meeting with editors for feedback; Mark has sent out poll for times

ACTION: (from Lyuba) We don't have any indication that the tool is working. Can we get an indicator, like a spinning circle, etc.


Security


Statistics Dashboard

OBJECTIVE 
Complete Migration of Statistics Dashboard from SumoLogic to DataDog by March 2024.

STATUS

Status meeting has been scheduled for every Friday
Request for additional info in the logs sent by Manish.  Tracy will forward. 
Sharepoint project has been created to track tasks.

ACTIONS

  • Check on status of collectors on other servers than evsexplore - Tracy


Comparison/Mapping Tool

On Hold

AWS Cloud to be in Separate Account

Waiting on AWS team

Team Absences


Mayo Team - Tracy out week of Feb12

MSC - 

Leidos - Mark out morning on Feb 16

QA - 

Gov - 



EVS SERVICE AND ARCHITECTURE GROUP UPDATES
EVS Service and Architecture Group
  • Lori attended - lots of discussion on Contact Us
  • Request permission to eliminate form part of Contact Us page - at least in short term
  • Lori to reach out with more information


DATA UPDATES
Data
  • NCIt 24.01e processing

BROWSER UPDATES

Browser
  • Contact Us page is creating Spam for NCIt email
    • Kim suggests discussion with Scott about this issue- has proposal
    • Mark suggests 
      • server side filtering
      • enhanced captcha
      • service to handle the email -CRM (Customer Relationship Manager)
        • ClinVar uses this system
  • 2 tags ready for QA 
    • NCIm having issues coming up
      • Scott to consult, as cache issues similar to Terms Browser
    • Term Browser in QA
      • 3 Jira tickets passed to Scott

QA UPDATES

QA
  • Regression for Term Browser - 3 tickets
  • NCIm issues being deployed
  • Prog and Reg 1.9 for EVSRestAPI on Stage
  • Prog and Reg for 1.9 EVS Explore in Progress
  • Test of 24.01e data tested on Stage for EVS Rest

TERMINOLOGIES LIFECYCLE REPORT

Terminology Updates and Schedule 


Mark Benson TPM Update

LexEVS Technical Debt Progress


Technical Debt Related Update

Estimated Effort

Status

Report Exporter vulnerabilities - design4 days
Report Exporter vulnerabilities - implementation5 days
Unit testing2 days
QA2 days
Deployment5 days (elapsed)

Vocabularies Slated for Production

  Terminology Updates and Schedule


Vocabulary Name

Local Name

Version

Arrival Date

Loaded to data-qa DB

Date to Stage

Date to Production

Vocabulary Name in LexBIG

Short Name

Version identifier

Date the vocabulary arrived for processing

Has the vocabulary been loaded to the data-qa database?

Approximate date the vocabulary version is scheduled to move to staging

Approximate date the vocabulary version is scheduled to move to production

NCI ThesaurusNCIt23.12d12/27/2023yes01/05/2401/09/24
NCIt-HGNCNCIt-HGNCJan202412/27/2023yes01/05/2401/09/24
SwissProtSwissProtJan202412/27/2023yes01/05/2401/09/24
ChEBIChEBIv22801/09/24yes01/12/2401/17/24
HGNCHGNCJan202401/09/24yes01/12/2401/17/24

QA Schedule and Status

see  QA Scheduling and Status



SECTION FOR FUNCTIONAL SYSTEM TESTING STATUS ::

Application and Version

Percentage Complete

Estimated Completion Date per Iteration

Priority Level 

Type Of Testing

Current Tier for Release (DEV, QA, Stage, Prod)

Expected Production Date

EVS REST API (v1.6)

100%

5/27/2022

High

Progression + Regression 

QA

6/6/2022

EVS Explore (v1.6)

100%

5/27/2022

High

Progression + Regression

QA

6/6/2022

EVS REST API(v1.6)

100%

6/1/2022

High

Regression

Stage

6/6/2022

EVS Explore(v1.6)

100%

6/2/2022

High

Regression

Stage

6/7/2022

EVS REST API(22.05e) - Monthly Data Deployment

100%

6/1/2022

High

Regression

Stage

6/3/2022

EVS REST API(22.05e) - Monthly Data Deployment

100%

6/3/2022

High

Regression

Production

6/3/2022

EVS REST API(v1.6)

100%

6/6/2022

High

Regression

Production

6/6/2022

EVS Explore(v1.6)

100%

6/7/2022

High

Regression

Production

6/7/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/3/2022

High

Regression

Stage

6/6/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/6/2022

High

Regression

Production

6/8/2022

EVS REST API(22.06d) - Monthly Data Deployment

100%

6/30/2022

High

Regression

Stage , Production

6/30/2022

NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment

100%

7/8/2022

High

Smoke

Stage,Production

7/8/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/3/2022

High

Regression

Stage

6/6/2022

NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment100%7/8/2022HighSmokeStage,Production7/8/2022
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment)100%7/12/2022HighSmokeStage7/12/2022
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment)100%7/13/2022HighSmokeProduction7/13/2022

EVS REST API(22.07d) - Monthly Data Deployment

100%

7/27/2022

High

Regression

Stage , Production

7/27/2022

NCIt,NCIm,TermForm(22.07d) - Monthly Data  Deployment100%8/1/2022HighSmokeStage,Production8/1/2022
NCIt,NCIm,TermForm(CanMED, GO & HGNC AUG 2022 Deployment)100%8/3/2022HighSmokeStage,Production8/3/2022

EVS REST API - 1.6.1 (Hot Fix Deployment)

100 %

8/3/2022

Highest

Progression + Regression

Stage,Production

8/4/2022


Attendees

Name

Role

Present

Remennik, LyubovNIH/NCIcheck mark button 

Safran, Tracy

NIH/NCI [C]
Ong, Kim LNIH/NCI [C]check mark button 
Lucas, Jason RNIH/NCI [C]check mark button 
Bauer, Scott  NIH/NCI [C]
Alkis, BarryNIH/NCI [C]<checked in>
Solie, ChuckNIH/NCI [C]
Kondareddy, SwathiNIH/NCI [C]check mark button
Singh, ItendraNIH/NCI [C]check mark button
Zhang, ChaoNIH/NCI [C]check mark button
Johnson, ConnieNIH/NCI [C]
Whiteman, LoriNIH/NCI [C]
Benson, MarkNIH/NCI [C]check mark button
Andrew MooreNIH/NCI [C]



JIRA Issues


Recent EVS Stats Dashboard Related Bugs and Features 

Key Summary T Created Reporter P Status
Loading...
Refresh

Recent Report Exporter Related Bugs and Features 

|

Key Summary T Created Reporter P Status
Loading...
Refresh

Recent LexEVS Related Bugs and Features 

Key Summary T Created Reporter P Status
Loading...
Refresh

Recent CTS2 Service Related Issues 

Key Summary T Created Updated Due Assignee Reporter P Status Resolution
Loading...
Refresh


ASSIGNED ACTION ITEMS

DescriptionDue dateAssigneeTask appears on
09 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.25
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.25
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.25
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.18
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.18
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.11
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.04
Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2024.09.11
  • Get the Report ready and submitted this week
LexEVS Meeting Minutes - 2024.09.04
  • Mark to follow up on ticket status/ subproject structure
LexEVS Meeting Minutes - 2024.09.04
  • Mark to follow up on ticket status/ subproject structure
LexEVS Meeting Minutes - 2024.08.28
  • Mark to follow up on ticket status/ subproject structure
LexEVS Meeting Minutes - 2024.08.21
  • Mark to follow up on ticket status/ subproject structure
LexEVS Meeting Minutes - 2024.08.14
  • Tracy to ping for status
LexEVS Meeting Minutes - 2024.08.14
  • Tracy to send invite to systems to discuss migration in this meeting
LexEVS Meeting Minutes - 2024.07.17
  • Temporarily block Singapore traffic
LexEVS Meeting Minutes - 2024.06.05
  • Tracy to request shut down of instance to save resources
LexEVS Meeting Minutes - 2024.06.05
  • Temporarily block Singapore traffic
LexEVS Meeting Minutes - 2024.05.29
  • Tracy to request shut down
LexEVS Meeting Minutes - 2024.05.29
  • Check status of termform and Tomcat9
LexEVS Meeting Minutes - 2024.05.15



  • No labels