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Agenda

EVS Discussion

Open System Tickets

Ticket Description Actions, Update
NCI-RITM046506 MEME URI not working, hostname usable as workaround

Still working on escalating this issue. Contact made.  Being escalated to management

NCI-INC0805939, NCI-INC0805936CTS2 down on Dev and QA
Met with Systems team to debug on Tu, Feb 27. Waiting to hear back on additional debugging work.  Zihua actively working on the issue and comparing lower and upper tiers.  Appears to be linked to OS update.
NCI-RITM0512149Security consult about IP traffic to Prod
Asked for dynamic IP throttling
 Report Exporter down on Stage


SYSTEMS
EVS transition to virtual machines

STATUS:We need to have a decision about how to handle PROD Server - configured.  Met with Eric today.

Stage 2 VM updated from 2 to 32 CPUs

We were going to wait to switch STAGE from on prem to VM once PROD server is ready; so we can switch both PROD and STAGE at same time . 

We are waiting until OS conversions are complete and then will work on Prod system. 

  • DECIDED: conversion first, then transition to VMs.  Likely end of March
  • we are probably a ways from PROD VM; STAGE VM saw issues pop up during transition



LEXEVS UPDATES

Monthly Planning and Focus

Completed Sprint - Sprint 216 (Jan 9 - Feb 2) -

Current Sprint  - Sprint 217 (Feb 2 - Mar 2) - Sprint 217

For the month of February 2024

  • Report Exporter

  • Improvements, Refactoring Code Debt, Feature development:
  • Examine feasibility of Java 17
  • DataDog
  • NCI Terms Browser
Technical Debt remediation

LexEVS Code Debt Refactoring - Java 17 refactoring currently is in progress

  • Tomcat 9 partially installed on Dev.  Waiting on Java 8 cts2 problems to be resolved before asking for completion
OS Updates

QA conversions starting - dev and QA updated. Some issues with CTS2 being debugged

Report Exporter
  • Working on templating - on pause for the moment, waiting on feedback
  • Wait time indicator on QA
    • Release notes written
  • Staging down, ticket entered.


Security


Statistics Dashboard

OBJECTIVE 
Complete Migration of Statistics Dashboard from SumoLogic to DataDog by March 2024.  Hard end in April.

STATUS

  • S3 bucket has been created, but is blocked by next step of installing a Datadog / AWS integration. 
    • Cyrus to provide ARN and script that will be accessing the bucket.
  • RUM installation started
  • Collectors installed on all servers except evs.nci.nih.gov

ACTIONS

    • Mark is working with Syed and Cyrus for configuration work. Systems is having problems doing configuration
Comparison/Mapping Tool

On Hold

AWS Cloud to be in Separate Account

Waiting on AWS team

Team Absences


Mayo Team - Andrew off March 6

MSC - 

Leidos - 

QA - 

Gov - 



EVS SERVICE AND ARCHITECTURE GROUP UPDATES
EVS Service and Architecture Group

EVS PROD Outage

  • Scott made the point about needing metrics for server performance, resources when issues/outages occur. CPU hit 1200% during the slowdown before we restarted.
    • Maybe not releasing sessions - still being diagnosed
    • L3caching might be an issue- could be resolved by new hardware
  • Some remediation being made on Stage to help with startup caching
  • Contact Us page - being discussed with Lori


DATA UPDATES
Data
  • 24.02d is on DataQA.
  • Meta to be processed after monthly vocabs
    • Files being published - ticket entered

BROWSER UPDATES

Browser
  • A proposal for handling the Contact Us SPAM is being drafted.
  • Terms and Meta Browser tags deployed to Prod
    • Still need to go to DataQA when ready

QA UPDATES

QA
  • Data deploy 24.02d for AWS Prod and Stage
  • Monthly data deployment for on-prem Prod and Stage
  • Terms and NCIm Browsers verified for Prod
    • ExportXML issue resolved
  • OS updates tested. Only issue is CTS2
  • Report Exporter being tested on QA

TERMINOLOGIES LIFECYCLE REPORT

Terminology Updates and Schedule 

Mark Benson TPM UpdateLots of plates spinning - progress being made

OS Conversion

This set will be converted on and rebooted morning of  

Server NameTier (DEV,QA,Stage,Prod)Purpose of ServerOn-prem/Cloud
nciws-q2022-cQAReport Writer 2Cloud
nciws-q1099-cQAEVS ExploreCloud
ncias-q2229-cQAEVSRESTAPICloud
ncidb-q294-cQAStardogCloud
nciws-q2361-vQAEVS Legacy ApplicationsOn-prem
ncias-q1744-vQAOperations processingOn-prem
nciws-q2261-cQAReport ExporterCloud
ncias-q1744-vQAserver used to process NCIT (and other) vocabularies.  It’s under the protege projectOn-prem
nciws-q791-vQAProtege QA serverOn-prem
https://gdc-mvs-qa.nci.nih.gov/gdc/
nciws-q916-v
QAGDC MVSOn-prem
https://sip-qa.semantics.cancer.gov/evssip/
nciws-q2247-v
QAEVS SIPOn-prem
ncias-q3009-cQA(meme-test) serverCloud


Vocabularies Slated for Production

  Terminology Updates and Schedule


Vocabulary Name

Local Name

Version

Arrival Date

Loaded to data-qa DB

Date to Stage

Date to Production

Vocabulary Name in LexBIG

Short Name

Version identifier

Date the vocabulary arrived for processing

Has the vocabulary been loaded to the data-qa database?

Approximate date the vocabulary version is scheduled to move to staging

Approximate date the vocabulary version is scheduled to move to production

NCI ThesaurusNCIt23.12d12/27/2023yes01/05/2401/09/24
NCIt-HGNCNCIt-HGNCJan202412/27/2023yes01/05/2401/09/24
SwissProtSwissProtJan202412/27/2023yes01/05/2401/09/24
ChEBIChEBIv22801/09/24yes01/12/2401/17/24
HGNCHGNCJan202401/09/24yes01/12/2401/17/24

QA Schedule and Status

see  QA Scheduling and Status



SECTION FOR FUNCTIONAL SYSTEM TESTING STATUS ::

Application and Version

Percentage Complete

Estimated Completion Date per Iteration

Priority Level 

Type Of Testing

Current Tier for Release (DEV, QA, Stage, Prod)

Expected Production Date

EVS REST API (v1.6)

100%

5/27/2022

High

Progression + Regression 

QA

6/6/2022

EVS Explore (v1.6)

100%

5/27/2022

High

Progression + Regression

QA

6/6/2022

EVS REST API(v1.6)

100%

6/1/2022

High

Regression

Stage

6/6/2022

EVS Explore(v1.6)

100%

6/2/2022

High

Regression

Stage

6/7/2022

EVS REST API(22.05e) - Monthly Data Deployment

100%

6/1/2022

High

Regression

Stage

6/3/2022

EVS REST API(22.05e) - Monthly Data Deployment

100%

6/3/2022

High

Regression

Production

6/3/2022

EVS REST API(v1.6)

100%

6/6/2022

High

Regression

Production

6/6/2022

EVS Explore(v1.6)

100%

6/7/2022

High

Regression

Production

6/7/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/3/2022

High

Regression

Stage

6/6/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/6/2022

High

Regression

Production

6/8/2022

EVS REST API(22.06d) - Monthly Data Deployment

100%

6/30/2022

High

Regression

Stage , Production

6/30/2022

NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment

100%

7/8/2022

High

Smoke

Stage,Production

7/8/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/3/2022

High

Regression

Stage

6/6/2022

NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment100%7/8/2022HighSmokeStage,Production7/8/2022
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment)100%7/12/2022HighSmokeStage7/12/2022
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment)100%7/13/2022HighSmokeProduction7/13/2022

EVS REST API(22.07d) - Monthly Data Deployment

100%

7/27/2022

High

Regression

Stage , Production

7/27/2022

NCIt,NCIm,TermForm(22.07d) - Monthly Data  Deployment100%8/1/2022HighSmokeStage,Production8/1/2022
NCIt,NCIm,TermForm(CanMED, GO & HGNC AUG 2022 Deployment)100%8/3/2022HighSmokeStage,Production8/3/2022

EVS REST API - 1.6.1 (Hot Fix Deployment)

100 %

8/3/2022

Highest

Progression + Regression

Stage,Production

8/4/2022


Attendees

Name

Role

Present

Remennik, LyubovNIH/NCIcheck mark button 

Safran, Tracy

NIH/NCI [C]
Ong, Kim LNIH/NCI [C]check mark button 
Lucas, Jason RNIH/NCI [C]check mark button 
Bauer, Scott  NIH/NCI [C]
Alkis, BarryNIH/NCI [C]<checked in>
Solie, ChuckNIH/NCI [C]
Kondareddy, SwathiNIH/NCI [C]check mark button
Singh, ItendraNIH/NCI [C]check mark button
Zhang, ChaoNIH/NCI [C]check mark button
Johnson, ConnieNIH/NCI [C]
Whiteman, LoriNIH/NCI [C]
Benson, MarkNIH/NCI [C]check mark button
Andrew MooreNIH/NCI [C]



JIRA Issues


Recent EVS Stats Dashboard Related Bugs and Features 

Key Summary T Created Reporter P Status
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Recent Report Exporter Related Bugs and Features 

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Key Summary T Created Reporter P Status
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Recent LexEVS Related Bugs and Features 

Key Summary T Created Reporter P Status
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Recent CTS2 Service Related Issues 

Key Summary T Created Updated Due Assignee Reporter P Status Resolution
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ASSIGNED ACTION ITEMS

DescriptionDue dateAssigneeTask appears on
09 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.25
09 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.18
09 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.04
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.25
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.25
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.18
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.18
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.11
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.04
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.04
25 Oct 2023Safran, Tracy (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.04
  • Tracy - check on any remaining tasks
LexEVS Meeting Minutes - 2024.04.17
  • Schedule followup meeting
LexEVS Meeting Minutes - 2024.04.03
  • Tracy to check with team
LexEVS Meeting Minutes - 2024.03.27
  • will need additional work to install Datadog / AWS integration. working with Cyrus and Systems.
LexEVS Meeting Minutes - 2024.02.21
  • will need additional work to install Datadog / AWS integration. working with Cyrus and Systems.
LexEVS Meeting Minutes - 2024.02.14
Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2024.02.07
  •  Short meeting to determine audience for app
LexEVS Meeting Minutes - 2024.02.07
  • Mark to reach out by Friday if we don't hear back
LexEVS Meeting Minutes - 2024.01.31
  • Mark to schedule meeting with editors for feedback; Mark has sent out poll for times
LexEVS Meeting Minutes - 2024.01.31



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