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Agenda

EVS Discussion

Open System Tickets

Ticket Description Actions, Update

NCI-RITM0520059/NCI-SCTASK0867247

CTS2 down on Dev and QA
Visual VM working Dev

NCI-RITM0512149

Security consult about IP traffic to Prod
Asked for dynamic IP throttling
Working to escalate using WAF (Web Application Firewall)
Mark to keep close eye on this

 NCI-RITM0524607

Add DataDog collectors to Prod2 server

Pinged today to check status

NCI-RITM0514215Remove Extensions folder from Stage and Prod

Complete

MultipleRequests to remove all SumoLogic collectors

Systems working on this


Mount point failures on jenkins

Affects ftp updates.


Data Deployments to Dev and QA


EVS transition to virtual machines

STATUS:

  • Prod2 server up and running - completed tested
  • DATAQA next


  • Tomcat 8.5 reached EoL - needing new stacks for all tiers
    • Oracles OES8, Tomcat 10, Java 17 
      • Java 17 implemented
      • Others to follow once 17 on Pro
    • Options
      • Tomcat 9 and Java 17 installed on Dev
      • evs-jenkins working for NCItBrowser and lexevscts2
      • OES8 could come later
    • NCItermform installed on Dev - needs testing
  • Stage 2 - all upgrade
  • Prod 2 - all upgrade
    • OEL8 needed
  • Kathy Coleman watching the progress
  • Tomcat 9 installed on Dev.  
    • Jenkins complete for NCItBrowser and CTS2
    • Recoding needed for NCIm
    • NCI Term Form needs testing
  • Check status of termform and Tomcat9 - 
  • Meeting scheduled Thursday for Visual VM



LEXEVS UPDATES

Monthly Planning and Focus

Completed Sprint - Sprint 219 (Mar 5 - May 10) -

Current Sprint  - Sprint 220 (May 13 - May 31) - 

For the month of May 2024

Report Exporter
  • Working on templating starting
    • Doing phase 1 - moved to Stage
      • Stage EVS Rest API having issues
      • Cloud team addressing the issue
    • In progress: implement file-based template storage
      • Code completed
      • On Dev issue with Rest APi affecting testing - working currently
        • Tomcat 9 testing - working with systems to find resolution
        • Having trouble moving page to page - possible http/https conflict
    • Moving Dev and QA to run from 7AM-10PM


Security

Tomcat 8.5 is EOL - risk if new vulnerability discovered

  • Oracle Java 8 - still being used on DataQA
    • Still present on other servers, in $PATH
    • Java 17 being added next week
  • Protege servers are now Corretto on Dev and QA
    • Need to check upper tiers

Statistics Dashboard

OBJECTIVE 
Complete Migration of Statistics Dashboard from SumoLogic to DataDog by June 1 2024.  

STATUS

  • S3 bucket has been created
    • Working on integration
    • successfully tested refresh
    • need to operationalize - testing going on
  • Collectors installed on all servers 
    • Apache config complete
  • Apache logs being pulled in for p805
    • evs.cancer.gov now working
      • EVSRESTAPI/EVSExplorer - fixed
      • FTP1 downloads - fixed
  • Prod 2 collectors installed, need pipelines
  • New Dashboards being made - can be shared

Link: Sharepoint Project Task Checklist

Comparison/Mapping Tool

On Hold

  • Moved to 7-10
  • shutdown to save resources?
    • Is old architecture so needs update work if kept
    • Per Lyubov - can shut down server for now
AWS Cloud to be in Separate Account

Waiting on AWS team

Team Absences


Mayo Team - Scott working vacation late May - Starting May 16, Andrew June 17-23

MSC - 

Leidos - 

QA - 

Gov - Memorial Day Monday May 27



EVS SERVICE AND ARCHITECTURE GROUP UPDATES
EVS Service and Architecture Group

Discussion about migrations and status.

DataQA to be rebooted to update OS


DATA UPDATES
Data
  • NCIt published last week
  • Monthlies are on Stage and being tested. Prod this week

BROWSER UPDATES

Browser
  •  Possibly reboot NCIt every morning? Idea rejected
  • This week has been calm

QA UPDATES

QA
  • Prod Deployment testing for the NCIt completed 24.04e
  • Monthlies being tested on Stage
  • Ad hoc testing on NCIt and NCIm last week for migrations

TERMINOLOGIES LIFECYCLE REPORT

Terminology Updates and Schedule 

Mark Benson TPM UpdateCBIIT to AWS connection physically cut a few days ago.  Issues have been occurring since then.


Vocabularies Slated for Production

  Terminology Updates and Schedule


Vocabulary Name

Local Name

Version

Arrival Date

Loaded to data-qa DB

Date to Stage

Date to Production

Vocabulary Name in LexBIG

Short Name

Version identifier

Date the vocabulary arrived for processing

Has the vocabulary been loaded to the data-qa database?

Approximate date the vocabulary version is scheduled to move to staging

Approximate date the vocabulary version is scheduled to move to production

NCI ThesaurusNCIt24.02d02/27/2024yes03/05/2403/09/24
NCIt-HGNCNCIt-HGNCFeb202402/27/2024yes03/05/2403/09/24
SwissProtSwissProtFeb202402/27/2024yes03/05/2403/09/24
CanMedCanMedFeb202403/09/24yes03/12/2403/17/24
ChEBIChEBIv23103/09/24yes03/12/2403/17/24
HGNCHGNCMar202403/09/24yes03/12/2403/17/24

QA Schedule and Status

see  QA Scheduling and Status



SECTION FOR FUNCTIONAL SYSTEM TESTING STATUS ::

Application and Version

Percentage Complete

Estimated Completion Date per Iteration

Priority Level 

Type Of Testing

Current Tier for Release (DEV, QA, Stage, Prod)

Expected Production Date

EVS REST API (v1.6)

100%

5/27/2022

High

Progression + Regression 

QA

6/6/2022

EVS Explore (v1.6)

100%

5/27/2022

High

Progression + Regression

QA

6/6/2022

EVS REST API(v1.6)

100%

6/1/2022

High

Regression

Stage

6/6/2022

EVS Explore(v1.6)

100%

6/2/2022

High

Regression

Stage

6/7/2022

EVS REST API(22.05e) - Monthly Data Deployment

100%

6/1/2022

High

Regression

Stage

6/3/2022

EVS REST API(22.05e) - Monthly Data Deployment

100%

6/3/2022

High

Regression

Production

6/3/2022

EVS REST API(v1.6)

100%

6/6/2022

High

Regression

Production

6/6/2022

EVS Explore(v1.6)

100%

6/7/2022

High

Regression

Production

6/7/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/3/2022

High

Regression

Stage

6/6/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/6/2022

High

Regression

Production

6/8/2022

EVS REST API(22.06d) - Monthly Data Deployment

100%

6/30/2022

High

Regression

Stage , Production

6/30/2022

NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment

100%

7/8/2022

High

Smoke

Stage,Production

7/8/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/3/2022

High

Regression

Stage

6/6/2022

NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment100%7/8/2022HighSmokeStage,Production7/8/2022
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment)100%7/12/2022HighSmokeStage7/12/2022
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment)100%7/13/2022HighSmokeProduction7/13/2022

EVS REST API(22.07d) - Monthly Data Deployment

100%

7/27/2022

High

Regression

Stage , Production

7/27/2022

NCIt,NCIm,TermForm(22.07d) - Monthly Data  Deployment100%8/1/2022HighSmokeStage,Production8/1/2022
NCIt,NCIm,TermForm(CanMED, GO & HGNC AUG 2022 Deployment)100%8/3/2022HighSmokeStage,Production8/3/2022

EVS REST API - 1.6.1 (Hot Fix Deployment)

100 %

8/3/2022

Highest

Progression + Regression

Stage,Production

8/4/2022


Attendees

Name

Role

Present

Remennik, LyubovNIH/NCIcheck mark button 

Safran, Tracy

NIH/NCI [C]
Ong, Kim LNIH/NCI [C]check mark button 
Lucas, Jason RNIH/NCI [C]check mark button 
Bauer, Scott  NIH/NCI [C]
Alkis, BarryNIH/NCI [C]<checked in>
Solie, ChuckNIH/NCI [C]
Kondareddy, SwathiNIH/NCI [C]check mark button
Singh, ItendraNIH/NCI [C]check mark button
Zhang, ChaoNIH/NCI [C]check mark button
Johnson, ConnieNIH/NCI [C]
Whiteman, LoriNIH/NCI [C]
Benson, MarkNIH/NCI [C]check mark button
Andrew MooreNIH/NCI [C]



JIRA Issues


Recent EVS Stats Dashboard Related Bugs and Features 

Key Summary T Created Reporter P Status
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Recent Report Exporter Related Bugs and Features 

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Key Summary T Created Reporter P Status
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Recent LexEVS Related Bugs and Features 

Key Summary T Created Reporter P Status
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Recent CTS2 Service Related Issues 

Key Summary T Created Updated Due Assignee Reporter P Status Resolution
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ASSIGNED ACTION ITEMS

DescriptionDue dateAssigneeTask appears on
09 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.25
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.25
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.25
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.18
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.18
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.11
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.04
  • Temporarily block Singapore traffic
LexEVS Meeting Minutes - 2024.06.05
  • Tracy to request shut down of instance to save resources
LexEVS Meeting Minutes - 2024.06.05
  • Temporarily block Singapore traffic
LexEVS Meeting Minutes - 2024.05.29
  • Tracy to request shut down
LexEVS Meeting Minutes - 2024.05.29
  • Check status of termform and Tomcat9
LexEVS Meeting Minutes - 2024.05.15
  • Meeting scheduled Thursday for Visual VM
LexEVS Meeting Minutes - 2024.05.15
  • Schedule followup meeting
LexEVS Meeting Minutes - 2024.04.03
  • Tracy to check with team
LexEVS Meeting Minutes - 2024.03.27
  • will need additional work to install Datadog / AWS integration. working with Cyrus and Systems.
LexEVS Meeting Minutes - 2024.02.21
  • will need additional work to install Datadog / AWS integration. working with Cyrus and Systems.
LexEVS Meeting Minutes - 2024.02.14
Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2024.02.07
  •  Short meeting to determine audience for app
LexEVS Meeting Minutes - 2024.02.07
  • Mark to reach out by Friday if we don't hear back
LexEVS Meeting Minutes - 2024.01.31



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