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Glossary
This glossary defines acronyms, abbreviations, and terminology used in this guide.

Term

Definition

caBIG

cancer Biomedical Informatics Grid

caBIO

Cancer Bioinformatics Infrastructure Objects

caCORE

cancer Common Ontologic Representation Environment

caDSR

Cancer Data Standards Repository

caMOD

Cancer Models Database

CGH

Comparative Genomic Hybridization

EBI

European Bioinformatics Institute

EVS

Enterprise Vocabulary Services

MAGE 1.1

MAGE 1.1 is a widely-used microarray data standard or guideline

MAGE-ML software format

XML-based standard for representation of microarray data

MIAME 1.1

MIAME1.1. is a standard or guideline for the minimum amount of information required to make a microarray record useful to others.

MGED Ontology

MGED Ontology is a controlled vocabulary standard that concisely defines terms as they relate to Microarrays and caArray as a whole

MGED

Microarray Gene Expression Data Society

MMHCC

Mouse Models of Human Cancers Consortium

NCI

National Cancer Institute

NCICB

National Cancer Institute Center for Bioinformatics

URI

Uniform Resource Identifier

URL

Uniform Resource Locators

XML

Extensible Markup Language () - XML is a subset of Standard Generalized Markup Language (SGML). Its goal is to enable generic SGML to be served, received, and processed on the Web in the way that is now possible with HTML. XML has been designed for ease of implementation and for interoperability with both SGML and HTML

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