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Preparing to Use Globus
If you need to move a large volume of data, you can do so using a Globus endpoint. The system uses Globus for high performance transfer of large files. Endpoints represent locations on a file transfer service server, such as gridftp. A prerequisite is a guest collection. To prepare a Globus endpoint: Log into GlobusViewing and Browsing caDSR Models
browser and portal step include From the View menu, select Browse and then select Models - View/Browse. The corresponding page appears. (Logged in users can add pages like this to their favorites. For instructions, refer to Managing Favorites.) In the row for the model you would like to view, click the View icon.Importing Updates to Registered Models
Download the Model Import template. (Start with a fresh template for each import.) Populate your file with information about the models that you want to import. The following table provides instructions for each column in the model import template. Currently, all columns are required: Column Name InstructionsTemplates and Instructions for Bulk Imports and Matching
Some of the features in caDSR II allow you to process content from a CSV file for bulk/batch importing to create new content. To view or use these features, log in as described in Logging In. These features need specially formatted templates that are attached to this wiki page. Conventions Common usage details forcaDSR II Sprint 1.53.4.0 Release Notes
National Cancer Institute Center for Biomedical Informatics and Information Technology caDSR Sprint 1.53.4.0 Release Notes 21-Mar-2024 Improvements The following are tracker numbers and descriptions of improvements. Feature Description Jira Tracker Number API https://tracker.nci.nih.gov/browse/DSRMWS-305. Examples for Model Mapping Services
The caDSR team has deprecated this API. The query parameter for the "model" attribute is a "Like" query with a wildcard to the right (as in '<model>%%'). Therefore, "PCOR" finds "PCORNet CDM 4.0" and "CRDC" finds "All CRDC Standard Data Elements". Models are currently represented in caDSR using a Classification4. Examples for Administered Components
caDSR API Examples Overview include This page includes the following topics. An administered component in the API is equivalent to an administered item in OneData. Retrieve All Administered Components Associated with ClassSchemeClassSchemeItem with Particular ID The following example retrieves all Administered Co3. Examples Using Concepts
caDSR API Examples Overview include This page includes the following topics. About Concepts The meaning of content in the caDSR Repository is based on linkages to concept from curated concept systems. Mostly, NCI prefers the use of the NCI Thesaurus (NCIt) for these annotations due to the breadth of concepts in N2. Examples for Forms and Related Items
caDSR API Examples Overview include This page includes the following topics. Find a Form Using Form Public ID and Version, Display Basic Metadata Attributes The following example finds a Form where Public ID = 2392775 and Version=1.0, displaying the basic metadata attributes. The URL for the results from the caDRegistering a New Model
To request registration of a new model, contact the caDSR RA caDSR.RA@mail.nih.gov mailto:caDSR.RA@mail.nih.gov.
