Page History
...
Publications Overview
When you click the Publications option on the caNanoLab menu bar, the Manage Publications home page appears. The panel on the page provides the following options:
...
Once a publication is submitted and associated with one or more specific samples, when the sample is opened in caNanoLab, the associated publications are listed on the Publication All tab. Where appropriate, the publication list includes hypertext links so you can open the publication(s).
Info | ||
---|---|---|
| ||
If you work from the Publications menu option discussed in this section, you can associate multiple samples with a publication. If you add publications to an open sample, you can use the copy feature to associate the publication with other samples. |
Submitting a Publication
Info | ||
---|---|---|
| ||
This help topic opens from the Update Publication page as well as well as from the Submit Publication page. For more information about the Update Publication page, see 6 - Managing Publications in caNanoLab 2.1 DRAFT. |
The Submit Publication feature allows you to identify a publication and associate it with one or more samples.
To define a sample publication, follow these steps:
When no sample is selected:
...
- Click Publication from the Navigation Tree when a sample is open. Click the Add button that corresponds to the publication type you plan to add.
From this point on, the process is very similar. Variations in the steps are noted in the following table.The following table lists and describes each field. Select or enter the appropriate information in the text fields and drop-down lists.
Tip title Other options By default, all fields are blank.
Include Page Other options Other options Fields may change, depending upon your launching point and your selection of Publication Type. Asterisks indicate required fields.
Sample Publication Criteria
By default, all fields are blank.title Other options Other options SampleDescription Publication Type*
Include Page
Other options Publication
Description Publication Type*
PublicationInclude Page type Publication type Publication Status* Include Page Publication status Publication status
Research Category* Include Page Research category Research category Enter the PubMed ID (click the Click to look up PubMed Identifier hypertext link where you can search for the ID).PubMed ID
Include Page PubMed ID PubMed ID Enter the digital object ID, if you know it.
Title
Enter the title. (See PubMed ID description for how to auto-populate this field)
Journal
Enter the journal. (See PubMed ID description for how to auto-populate this field).
Year of Publication/Volume
Enter the year of the publication and the volume, where available.
Start Page/End Page
Enter the page range for the publication.
Authors
Enter the name of one author. (See PubMed ID description for how to auto-populate this field). Click Add Author to add additional authors.
Keywords
Enter a term that can be used in a search query to find the publication.
Description
Enter an appropriate description for the publication.
Upload File
or
Enter File URLClick the Browse button to navigate to the publication to be associated with the sample, or enter the URL where the publication is located.
Note: This field appears on the page only when opened from the Publication menu option, not the Navigation Tree.Sample Name*
Enter the exact or partial name and click the search icon ( ) to find the names of samples in caNanoLab. Select one or more sample sample names to be associated with the publication.
Notes:
- You can submit a publication without identifying a sample ID.
If you are submitting a publication from within an open sample, this field is replaced by the Copy section, described below.
Copy
This section replaces the Sample Name field if you are submitting a publication from within an open sample. If that is the case, you can use this copy feature to associate the publication with other samples to which you have access.
Select one or more samples to be associated with this publication.Access to the Publication Access to the Publication can be assigned to either Collaboration Groups or Users. Click the search icon to select select from collaboration groups to which you have read access.
When you submit new data into the system, by default, the person submitting the data and anybody in the Curator group automatically have CURD (create, update, read, delete) access to the data. Other access must be manually assigned through this function. - To clear the fields and start again, click Reset.
- Once you enter the appropriate information on the form, click Submit.
Editing a Publication
Title*
Enter the title. (See PubMed ID description for how to auto-populate this field)
Year of Publication The year that the publication was published. Authors
Enter the name of one author. Enter one author on each line.
Keywords
Enter a term that can be used in a search query to find the publication. Enter one keyword on each line.
Description Description for the publication.
Research Category* Include Page Research category Research category Upload File
or
Enter File URLClick the Browse button to navigate to the publication to be associated with the sample, or enter the URL where the publication is located.
Sample Name*
Enter one Sample Name per line.
Add information about Search and Select.
Access to Publication For more information, see 6 - Managing Publications in caNanoLab 2.1 DRAFT. To clear the fields and start again, click Reset.
- Once you enter the appropriate information on the form, click Submit.
Editing a Publication
You can edit You can edit a publication using the following techniques:
...
Tip |
---|
Publication criteria may change, depending upon the Publication Type of the selection. |
Details are described in the The following table lists and describes the fields. An asterisk indicates a required field. Click Update when you are done editing the Protocol. To disregard the changes, click Reset.
Publication Criteria | Description | ||||||
---|---|---|---|---|---|---|---|
Publication Type* |
| ||||||
Publication Status* |
| ||||||
PubMed ID | PubMed ID (can be a hypertext link).
| ||||||
Appropriate DOI | |||||||
Title | Publication title. (See PubMed ID description for how to auto-populate this field) | ||||||
Journal | Journal in which publication occurs. | ||||||
Year of Publication | Year of the publication. | ||||||
Volume | Volume of the publication | ||||||
Start/End Page | Page range for the publication | ||||||
Authors | Publication author:
| ||||||
| |||||||
Appropriate DOI. | |||||||
Publication Title | Select contains or equals and enter a partial or complete Publication Title that contains or is the same as what you searching for. | ||||||
Journal | Journal in which publication occurs. | ||||||
Year of Publication | Year of the publication. | ||||||
Volume | Volume of the publication | ||||||
Start/End Page | Page range for the publication | ||||||
Authors | Enter one author per line. | ||||||
Keywords | Term that can be used in a search query to find the publication. Enter one keyword per line. | ||||||
Description | Description for the publication. | ||||||
Research Category* |
| ||||||
Upload File | Click the Browse button to navigate to the publication to be associated with the sample, or enter the URL where the publication is located. | ||||||
Sample Name* | One or more sample names to be associated with the publication. | ||||||
Access to the Publication | Lists the Group Name that has access to the Publication:
Lists the type of Access that the Group has for the Publication:
|
...
To launch a search for a specific publication, follow these steps:
Click the Publications caNanoLab menu option. On the Manage Publication home page, click the Search Existing Publications link
. This opens the Search Publications form..Select or enter the appropriate information in the text fields and drop-down lists. Fields are described in the following table. Asterisks indicate required fields.. This opens the Search Publications form.
Tip When defining search criteria, there are no "required" fields. You can add only those parameters that you consider essential to the search. Add an asterisk for searching wildcards.
If you click the Search button having defined no parameters, all of the caNanoLab publications will be listed in the Search ResultsTip If you do not define any search criteria, caNanoLab will list all publications in the search results.
The following table lists and describes the fields. Select or enter the appropriate information in the text fields and drop-down lists. Asterisks indicate required fields.
Publication Search Options Description Publication Type
Include Page Publication type Publication type Research Category
Include Page Research category Research category PubMed ID
Enter the PubMed ID, if known.
Include Page PubMed ID PubMed ID Enter the name of the digital object ID, if you know itknown.
Publication Title
Enter Select contains or equals to enter a partial or complete Publication Title that contains or is the same as the name of the document.
Authors
Enter the name(s) of the authors. Enter one author per line.
Keywords
Enter a logical term that can be used to find the publication. Enter one term per line.
Sample Name
Enter the name of the sample.
There are two ways to search by Sample Name. You can use one way or use them in combination.
Select either contains or equals from the drop-down and enter a partial or complete Sample Name that contains or is the same as what you are searching for.
Composition Composition Nanomaterial Entity
Nanomaterial Entity
Select from the drop-down list the nanoparticle category to which the sample targeted by the search belongs. Example: Dendrimer
Composition Functionalizing Entity
Select from the drop-down list the functionalizing category to which the sample targeted by the search belongs.
Function
Include Page Function type Function type - To clear the form and start again, click Reset.
- To launch the search, click Search.
...