NIH | National Cancer Institute | NCI Wiki  

Error rendering macro 'rw-search'

null

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

Export Experiment Annotation Packages under Data, Download Data
!800px-Exp-option.jpg,alt="Export Experiment Annotation Packages under Data, Download Data"!

Exporting to MAGE-TAB

The user can generate MAGE-TAB files that consolidate the related annotation information about the experiment in the caArray repository.

...

MAGE-TAB (Annotations Only) Link
!MAGE-TAB-option.jpg,alt="MAGE-TAB (Annotations Only) Link"!

The MAGE-TAB generated is a live export of the current state of the experiment's annotations, capturing all previous changes made via MAGE-TAB import and/or the Annotations GUI.

...

Only the experiments entered into caArray via MAGE-TAB file upload are eligible for GEO SOFT Export. Various knowledge base entries (refer to caArray037) have been created explaining MAGE-TAB format files and how to upload MAGE-TAB them. A sample package, including datafiles and MAGE-TAB annotation files (.idf and .sdrf files), can be downloaded below to help the user get a quick start: [templates for MAGE-TAB format and related datafiles. – MAGE-TAB.zip –

An adventurous user may also download MAGE-TAB annotation files directly from caArray as explained in this article.

...