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Welcome to caArray. This topic is intended to get you started in caArray.

Are you interested in learning more about caArray?

See About caArray in the caArray User's Guide.

Are you interested in creating an experiment?

Workflow for creating an experiment automatically by importing MAGE-TAB files

{Workflow for creating an experiment by entering annotation data in caArray manually|https://wiki.nci.nih.gov/x/MoCHAw]

For more information, see Creating an Experiment.

Are you interested in browsing caArray?

See Browsing caArray Data in the caArray User's Guide.

Are you interested in performing a search of caArray data?

See Searching caArray Data in the caArray User's Guide.

These are initial tasks that you may wish to perform as you become acquainted with caArray. You will find more comprehensive material for working in caArray in the caArray User's Guide as well as on the caArray wiki pages of the caBIG_^® MAT KC.

Step-by-Step Instructions for Submitting an Experiment in caArray

Step 1: Log in to caArray

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Step 2: Import the Array Design File(s) used in the experiment

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Step 3: Create an Experiment

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Step 4: Create the MAGE-TAB files

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Step 5: Upload the MAGE-TAB and data files to the experiment

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Step 6: Validate the uploaded files

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Step 7: Import the files

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Step 8: If there is more than one (1) set of data files, repeat steps 4-7

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Step 9: Review the Experiment

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Step 10: Grant access to collaborators (if necessary)

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Step 11: Make Experiment Public

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Step 12: Lock Experiment