NIH | National Cancer Institute | NCI Wiki  

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
Comment: Moved contents to child pages, effectively splitting this page into multiple smaller pages.
Tip
iconfalse
titleAccess to Curation

If you are a logged in curator, Curation is available to review pending data and make it public, and batch generate, re-generate, and delete data availability metrics for samples.

This chapter introduces you to how to review and make pending data public and how to submit batch processes.

Panel
borderColorsilver
borderStylesolid
titleContents of This Chapter

Page Tree
expandCollapseAlltrue
root@self
startDepth2
searchBoxtrue

Wiki Markup
{scrollbar:icons=false}

...

 This section describes how to manage samples in caNanoLab with the Samples function. This section includes the following topics:

Table of Contents
minLevel2

Curating Data

Info
titleCurator permissions

When a user is given curation privileges and logs in as a curator, caNanoLab displays features unavailable to users without curation permissions. A curator can review data in caNanoLab and determine whether to make it publicly available. A curator can also manage batch data availability.

If you are logged in as a curator, click the Curation menu option. The Manage Curation page displays two options. Click one of these links for more information about these two curation tasks:

Reviewing Data Pending Release

  1. On the Manage Curation page, click the Review Data Pending Release to Public link.
    The Data Pending Review page that opens displays the list of data to be reviewed.
  2. Click the Edit link to open a data detail page where you can update a sample, as described in .
  3. After reviewing the submitted data, you can assign the data to be Public. To do so, click Add associated with the Access to the * function. In the Access Information section of the expanded page, select the Public radio button and click Save.

Managing Batch Data Availability

This feature allows you to generate or to remove data availability for multiple samples in a batch.

Click on this link in the Manage Curation page to open the Manage Batch Data Availability page. Three options are listed on this page: Generate data availability for all samples, Regenerate data availability of sample with existing availability, and Delete data availability for all samples.

Once you select any of these buttons and click the Submit button, the system informs you that the process will take a while. Upon finishing, caNanoLab opens a Results page with a message stating the status of the long running process.

Because the batch generation runs in the background, you can leave this page and continue browsing other parts of the portal and come back later to check the status of the process you initiated.

 

Wiki Markup
{scrollbar:icons=false}