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This chapter introduces you to how to review and make pending data public and how to submit batch processes.
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Managing Collaboration Groups | caNanoLab User's Guide| Using My Workspace
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A user assigned the Curator user role can log in and use the Curation menu to review protocols, samples, and publications for public access and generate data metrics for samples in batch mode. |
When you click the Curation menu, the Manage Curation page appears with the following options.
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If a user is not a curator and wants a protocol, sample, or publication that they own to be publicly-accessible, the user must submit it to a data curator for review. A data curator reviews the item, and when satisfied, changes it to Public access.
To review the data pending release to the public
- On the Manage Curation page, click Review Data Pending Release to Public.
The Data Pending Review page that opens displays the list of data to be reviewed. - Click the Edit link to open a data detail page where you can update a sample.
After reviewing the submitted data, you can assign the data to be Public. - Click Add associated with the Access and the Access Information panel opens.
- In the Access Information panel, select the Public radio button and click Save.
- The item is now publicly-accessible from the caNanoLab public home page.
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To generate or remove data availability for multiple samples in a batch
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| The owner of a sample can always generate data availability metrics for the individual sample. |
On the Manage Curation page, click Manage Batch Data Availability.
The Manage Batch Data Availability page opens.
The following sample data availability batch options are available.
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This batch process may take some time, but it runs in the background, so you can perform other options in caNanoLab. |
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Generates data availability metrics only for samples where metrics were generated previously.
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Removes all the current data availability metrics for all samples.
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Click Submit, and a message displays indicating that the process may take some time.
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| The batch generation runs in the background, so you can leave this page and continue using caNanoLab. |
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If you run a data metrics batch job from the Curation menu, you may be generating or removing metrics from many samples. This may take some time.
- You can continue to use caNanoLab while the batch processes.
- When the process completes, caNanoLab opens a Results page with a completion message.
- To check on the status of the process you initiated, click the Results menu.
The Long Running Processes table displays the status of the batch job.
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