NIH | National Cancer Institute | NCI Wiki  

Versions Compared

Old Version 3

changes.mady.by.user Unknown User (wileyal)

Saved on

compared with

New Version 4

changes.mady.by.user Unknown User (wileyal)

Saved on

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

Panel
titleContents
Toggle Cloak
idTOC
Cloak
idTOC
2

Topic: caArray Usage

Release: caArray Up to 2.2.0

...

As an information sharing tool, caArray can accept upload of many file types. The table below summarizes those file types, and where and how files are uploaded in caArray.

Have a comment?

Please leave your comment in the caArray End User Forum.

Scrollbar
iconsfalse

Upload Files into caArray

File Types

Validated?

File Destination

Uploading Step

Array Design File
(user Guide, p64)

Y

"Curation"
->"Manage Array Design"

"Manage Array Design"
-> "Import a New Array Design"

Files associated with samples:

  • Array Annotation file: .idf, .sdrf
  • Raw or Processed Array Data files
    (Any file type on the list under "Change File Types")

Y

"Experiment Management"
-> "Data"
->"Imported data"

"Experiment Management"
-> "Create/Propose Experiment"
or "My Experiment Workspace"
-> "Data"
-> "Manage Data"
-> "Upload New Data Files"
->Select Files
->Validate
->Import

Information Files Associated at Experiment level
(user Guide, p82)

  • Word documents,
  • Excel spreadsheets,
  • Power Point files, PDFs
    *Images

N

"Experiment Management"
->"Data"
->"Supplemental Files"

"Experiment Management"
->"Create/Propose Experiment"
or "My Experiment Workspace"
-> "Data"
-> "Manage Data"
-> "Upload New Data Files"
-> Select Files
-> "Add Supplemental Files"

Have a comment?

Please leave your comment in the caArray End User Forum.

Scrollbar
iconsfalse