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To view a GISTIC analysis page in caIntegrator where you can review or edit analysis parameters and results, under Study Data in the left sidebar, click Saved Copy Number Analysis. Select the analysis you want to open. The system displays analysis parameters and gene lists that that were retrieved from the analysis, as shown in the following figure.
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In the context of copy number data, 'Amplified genes' refers to a list of gene symbols in which the corresponding regions of the genome are significantly amplified. 'Deleted genes' is a list of gene symbols in which the corresponding regions of the genome are significantly deleted. |
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