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- On the Edit Study page under the Imaging Data Sources section, click the Add New button.
Info title Note If you have already provided an imaging data source, it is listed in this section of the Edit Study page. To edit the imaging data source, click the Edit button which opens the same dialog box described in the following steps.
- In the Edit Imaging Data Source dialog box, configure the appropriate imaging data source information in the fields as shown in the selected area of the following figure and described below. Asterisks indicate required fields.
Fields
Description
NBIA Server Grid URL*
Enter the URL for the grid connection to NBIA.
NBIA Web URL
Enter the URL of the web interface of the NBIA installation.
NBIA Username and NBIA Password
This information is not required, as currently all data in the NBIA grid is Public data.
Collection Name
Enter the name/source for the collection you want to retrieve.
Current Mapping
If a mapping file has already been uploaded to the study to map imaging data, the file name displays here.
Select Mapping File Type
Click to select the file type:
--Auto – No file is required. Selecting this takes all subject annotation subject IDs and attempts to map them to the corresponding ID in the collection in NBIA. If the ID does not exist in NBIA, then no mapping is made for that ID.
--By Subject – Requires a mapping file to be uploaded. The "subject annotation to imaging mapping file" must be in CSV format with two columns that map the caIntegrator subject annotation subject ID to the NBIA subject ID.
--By Image Series – Requires a file to be uploaded. The subject annotation to imaging mapping file needs to be a two column mapping (CSV) from the caIntegrator subject annotation subject ID to the NBIA study instance UID.
- Auto – No file is required. Selecting this takes all subject annotation subject IDs and attempts to map them to the corresponding ID in the collection in NBIA. If the ID does not exist in NBIA, then no mapping is made for that ID.
- By Subject – Requires a mapping file to be uploaded. The "subject annotation to imaging mapping file" must be in CSV format with two columns that map the caIntegrator subject annotation subject ID to the NBIA subject ID.
- By Image Series – Requires a file to be uploaded. The subject annotation to imaging mapping file needs to be a two column mapping (CSV) from the caIntegrator subject annotation subject ID to the NBIA study instance UID.|
Subject to Imaging Mapping File
Click Browse to navigate to the appropriate subject annotation to imaging mapping file. See the Select Mapping File Type* field description.
Info title Note If mapping files have already been uploaded for the data sources you are editing, the Image Mapping tables of the dialog box show the mapping from NBIA Image Series Identifier to caIntegrator Subject Identifier.
- Click Save to upload the data from NBIA to caIntegrator. The imaging data displays on the Edit Study page under the Imaging Data Sources section, as shown in the following figure.
- Once the data is uploaded, you can add image annotations. For more information, see #Adding or Editing Image Annotations.
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