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Genomic data that is parsed and stored in caArray can be analyzed in caIntegrator. Additionally, supplemental files in caArray that have not been parsed can be uploaded and analyzed in caIntegrator. caIntegrator refreshes caArray data hourly and displays update status in the Manage Studies page and the Edit Sample Mappings page. |
Once you have loaded subject annotation data and identified subject IDs, you can add one or more sets of array genomic sample data from caArray to the study. caIntegrator maps the data by sample IDs to the subject IDs in the subject annotation data, covered in this section, or you can load imaging files from NBIA, also mapped by IDs to the subject data. This is discussed in #Working with Imaging Data. You can also edit genomic data information that you have already added to the study. Genomic sample data and imaging data are independent of each other, so neither is required before loading the other.
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