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For Gene criteria, caIntegrator finds and summarizes at the gene level all reporters that match criteria for the gene you defined on the Criteria tab. When displaying results at the gene level, the mean is displayed if there are two probes, the median if there is an odd number of probes greater than two and the mean of the two median probes if there is an even number of probes greater than two. Next to each gene symbol, caIntegrator displays an icon ("icon that opens information for the data associated with the icon. In the following figure) which you can click to open the Cancer Genome Anatomy Project (CGAP) showing data for the gene. Gene symbols and icons are identified in the following figure.
"Genomic query result matrix after gene criterion has been specified. Two sample gene names are circled. Each gene is accompanied by an icon whichImage Modified

If you have selected Gene Expression on the Results Type tab, then the column headers are a clickable label which sorts the entire table on that column. If you selected Reporter ID on the Results Type tab, the Reporter ID is clickable (and the gene is not clickable).

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