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This chapter describes how to search the local and any selected remote image databases for images.

Topics in this chapter include:

Performing Searches

TCIA enables you to search for images in the local TCIA in vivo image repository. If available, you can also search remote imaging archives.

TCIA is designed to perform the following tasks:

  • Search for images in simple or advanced search mode
  • Combine search criteria defined in those searches with keyword searches of curated annotation data
  • Save the search queries to be used repeatedly
  • Review query histories

As subjects, studies, series or images are located, save them to your data basket for download.

Downloading series with annotation files

When you download a series that has annotation files (indicated by Yes in the Contains Annotations column), they are automatically downloaded as well.

TCIA submissions are organized in the following hierarchy, which is important to remember in creating your search query and reviewing search results:

Collection > Patient (Subject) > Study > Series > Images

TCIA provides three search modes:

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Performing a Simple Search

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Performing a Text Search

A text search allows for searching of many of the database text fields, DICOM image tag data, and annotation files that are not available in the normal Simple and Advanced searches. For example, you can find all patients associated with the term glioma, as shown below.

To perform a text search

  1. On the NBIA home page, click Text Search or Search Images > Text Search.
    The Text Search page appears.

    empty text search fields

  2. Select the number of search results per page the search will return.
  3. In the box at the top of the page, enter a text string.
    Use Lucene conventions Exit Disclaimer logo for wildcards. Do not use colons as NBIA automatically filters them from the criteria. Lucene designates colons as fields. Since the text search searches all fields, colons are not necessary.
  4. Click Submit.
    The search results appear.
    search results from search term of brain

    Navigation Tips

    • Click the down arrow next to a column title to sort the column by that item.
    • Click the arrows at the bottom of the table to display the first, previous, next, or last page of results.
    • Click the page number links to move to a specific page of results.

    The following table describes each item in the search results table.

    Search ResultDescription
    Collection IDCollection identifier
    Subject ID

    Click the Subject ID to view all study images for this subject in a DICOM web viewer, a single series' thumbnails, or the DICOM header for the first image in the series. See Search Results (Studies for Subject).

    Hit

    The field in the study where the text string you entered as your search criteria appears.

    Total StudiesTotal number of studies for the subject
    Total SeriesTotal number of image series for the subject
    basket

    Add the images for a single series or the entire study to your data basket. When you have marked a record for addition to the data basket, it is highlighted in yellow.

    • Click add to data basket to select the record and remove from basket to clear it.
    • To mark all records in the search results as records you want to add to your data basket, click the basket icon in the column header or click add found to basket.

    For more information, see Managing the Data Basket.

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Performing an Advanced Search

An advanced search allows you to search against multiple combinations of values within Collections, Patient, Study,  Series, or Image objects. You can build search criteria based on data values or ranges at the image series level.

To perform an advanced search

  1. On the NBIA home page, click Advanced Search or Search Images > Advanced Search.
    The Advanced Search page appears.

    Advanced Search criteria
  2. Select the number of search results per page the search will return.
  3. From the Match options, select ALL to find image series that meet all of your search criteria or select ANY Criteria to find image series that meet any of your search criteria.
  4. From the first Criteria list, select an NBIA entity. Your selection here determines the options available for the rest of the search criteria.
  5. Select options from the lists or enter text into the box as needed to perform your search. If you enter text into the box, click the Add icon (plus sign button) for each set of criteria you define.
    As soon as you specify the final criterion, the criteria you selected appear in the box below the criteria and the search results appear to the right.

    Modality searches

    Modality searches only support the CT and MR modalities.


    advanced search results page

    Navigation Tips

    • Click the down arrow next to a column title to sort the column by that item.
    • Click the arrows at the bottom of the table to display the first, previous, next, or last page of results.
    • Click the page number links to move to a specific page of results.

    The following table describes each item in the search results table.

    Search ResultDescription
    Collection IDCollection identifier
    Subject ID

    Click the Subject ID to view all study images for this subject in a DICOM web viewer, a single series' thumbnails, or the DICOM header for the first image in the series. See Search Results (Studies for Subject).

    Matched Studies

    Total number of studies for this subject that match the search criteria

    Total StudiesTotal number of studies for the subject
    Matched SeriesTotal number of image series for the subject that match the search criteria
    Total SeriesTotal number of image series for the subject
    basket

    Add the images for a single series or the entire study to your data basket. When you have marked a record for addition to the data basket, it is highlighted in yellow.

    • Click add to data basket to select the record and remove from data basket to clear it.
    • To mark all records in the search results as records you want to add to your data basket, click the basket icon in the column header or click add found to basket.

    For more information, see Managing the Data Basket.

  6. To further refine your results, select new search criteria. These new criteria filter your existing results and as with the previous search, the criteria you selected appear in a box below the criteria. Click the close button to delete the record from the page or click reset button  to delete all criteria and start over.

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Working with Saved Queries

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Creating Saved Queries

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Viewing and Editing Saved Queries

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Viewing Query History

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