Name | Description | Link | |
---|---|---|---|
Pentaho | BI framework | https://github.com/pentaho | |
Neo4j | Native graph DB | https://neo4j.com/ | |
SciGraph | Stores ontologies in a native graph backend | https://github.com/SciGraph/SciGraph | |
Kettle (Pentaho) | ETL tool | https://github.com/pentaho/pentaho-kettle | |
Neptune (AWS) | Native graph db | https://docs.aws.amazon.com/neptune/#lang/en_us | |
KNIME | Workflow engine for data science | https://docs.aws.amazon.com/neptune/#lang/en_us | |
CWL | Common Workflow Language | Common Workflow Language User Guide | |
TinkerPop (Apache) | Open graph computing framework | http://tinkerpop.apache.org/ | |
Tidy Data | Conceptual framework for arranging data | The actual paper by Hadley Wickham | |
Elasticsearch (Elastic) | "Document" database | https://www.elastic.co/ | |
Pypher | Python Library to write Code in Cypher | https://github.com/emehrkay/Pypher | |
WDL | Workflow Description Language (Broad) | https://software.broadinstitute.org/wdl/ | |
Cromwell | WDL runner | https://github.com/broadinstitute/cromwell | |
Rabix | CWL Runner | http://rabix.io/ | |
GA4GH Cloud Workstream | DOS, WES, TES, TRS | https://github.com/ga4gh | |
Toil | CWL/WDL runner and WES implementation | http://toil.ucsc-cgl.org/ | |
FHIR (Fast Health Interoperability Resources) | Framework for intersystem communication of health information | https://hl7.org/fhir/ |