NIH | National Cancer Institute | NCI Wiki  

Error rendering macro 'rw-search'

null

You are viewing an old version of this page. View the current version.

Compare with Current View Page History

« Previous Version 36 Next »

When you search for Common Data Elements (CDEs) in OneData, keep in mind the following points:

  • CDEs follow the ISO/IEC 11179 standard, so you can search for data elements using ISO/IEC 11179-based attributes.
  • (TBD: Is each field set to "all" by default?)
  • Searches are not case sensitive. Searches for Gene and gene return the same results.
  • In any editable text field, enter a search string, complete or partial. This does not apply to numeric fields such as CDE Public ID. 
  • In any editable text field, you can use a percent sign (%) as a wildcard. For examples, refer to Using Wildcards - 2021-06-09.  
  • For some fields, you can adjust the search scope (with options such as IS NULL, IS NOT NULL, NOT LIKE, Exact Phrase Match, All Of The Words, or One Of The Words) by clicking the Advanced Filter icon. 
  • The system processes search criteria as AND statements, so only CDEs that fulfill all the criteria are returned.
  • To reset a list of values, click the Clear Values icon next to that list. 
  • When you remove or change search criteria, the system does not update search results until you click Apply Filter again.

To perform a data element search:

  1. Open a supported browser:
    • Chrome
    • Firefox
  2. Navigate to the following portal:

    https://wmonedata.nci.nih.gov/

    The home page appears. 

  3. From the View menu, select Browse and then select one of the following options:

    • Data Elements - View/Browse: Search for data elements used by or owned by any context. 
    • NCI Standard Data Elements: Search within released data elements that are either owned by or used by the NCI Standards Context. NCI considers these data elements to be standard for the NCI. These elements are a subset of the data elements available in Data Elements- View/Browse.
  4. If necessary, you can clear the saved filter from the upper right corner of the search criteria panel, or select a different one:

    • The default saved filter excludes retired (from Workflow Status), excludes test and training (from Owned By), and includes the latest version. 
    • Another saved filter excludes only test and training (from Owned By).
    • Another saved filter includes only test and training (from Owned By).
    • To clear the saved filter, set this field to Select a Filter.
  5. Specify one or more search criteria, as described in the following table: 

    FieldInstructions
    Enter Search StringEnter a search string, complete or partial. This field searches CDE Short Name, CDE Long Name, and any type of Question text. (To adjust search scope, click the Advanced Filter icon.)
    CDE Public IDEnter a public ID. You cannot use wildcards in this field. 
    CDE Long NameEnter a CDE long name, complete or partial. (To adjust search scope, click the Advanced Filter icon.)
    Multiple Public ID Search

    Enter a public ID, complete or partial.

    To specify multiple public IDs, click the Advanced Filter icon. In the adjacent field, select One of the Words. Enclose each ID in periods and separate each value with a space (for example: .5. .6. .10.). 

    CDE Short NameEnter a CDE short name, complete or partial. (To adjust search scope, click the Advanced Filter icon.) 
    Latest VersionData elements are assigned version numbers by the context administrator. Select one of the following options:
    • To search for the latest version of the CDE, select Yes.
    • To search for all versions except the latest version, select No.
    • To search for all versions, clear this field. (That is, set it to Select Value.) 
    Owned BySpecify the context that has administrative authority to edit and update the CDE.
    Registration StatusRegistration status filters your results based on the data element registration status. For details, refer to Registration Status - 2022-01-10
    Workflow StatusWorkflow status filters your results based on the administrative workflow status of the data element. In most cases, you will want to search for released data elements, but any status is available. For details, refer to Workflow Status - 2022-01-10
    OriginSpecify the source of the administered item.
    Origin DescriptionSpecify a search string for the origin description. 
    Program AreaSelect a program area.
    Created BySpecify the name of the person who created the item.
    Last Modified BySpecify the name of the person who last modified the item. (To adjust search scope, click the Advanced Filter icon.)
  6. In the fields that have a Select a Value icon, you can select one or more values. Click the Select a Value icon next to the field. A Reference Data Panel appears. 

    • To select one value: Click the value name. The value name appears in the field. 
    • To select one or more values: Click the checkbox for each row you want to include. Click Set Values. The field indicates how many values you have set. 
  7. For date criteria, click the Audit Columns icon and specify dates as described in the following table: 

    FieldInstructions
    Date CreatedClick the calendar icon and select the date on which the item was created.
    Date Last ModifiedClick the calendar icon and select the date on which the item was last modified.

    To adjust search scope, click the Advanced Filter icon and consider the following options:

    • The list to the left of each date field allows you to search for items later than (>), earlier than (<), and/or equal to the date you specify. 

    • The list to the right of each date field allows you to specify whether the date field is NULL or NOT NULL.
    • The check box below each date field allows you to specify a date range. 
  8. You can also create your own query to search, by specifying an explicit "where" clause. Click the Advanced Filter icon. Under Filter Options, select a column and then click >>. The name of the selected column appears in the text box. Complete the query string. (For example, if your query string is "a.CURRNT_VER_IND=1" when you click Apply Filter, the system returns all items of the latest version.)
  9. If necessary, you can specify additional criteria using a child filter. For details, click one of the following links:

    FieldInstructions
    Question TextType all or part of the actual text that appears for the data element on a Form. (To adjust search scope, click the Advanced Filter icon.)
    Question Type

    Select a question type:

    • Alternate Question Text 
    • Application Standard Question Text 
    • CDASH Alternate Question Text 
    • NRDS Question Text 
    • Preferred Question Text 
    • Standard Alternate Question Text
    Question Text NameType all or part of the question text name.
    ContextSelect one or more contexts. 
    LanguageSelect a language. 
    Enter Search StringEnter a search string, complete or partial. This field searches Question Text and Question Text Name. (To adjust search scope, click the Advanced Filter icon.)
    FieldInstructions
    Alternate NameA data element may have multiple alternate names in multiple contexts. Enter an alternate name or keyword. (To adjust search scope, click the Advanced Filter icon.)
    Alternate Name TypeSelect one or more alternate name types. (To adjust search scope, click the Advanced Filter icon.)
    ContextSelect one or more contexts. 
    LanguageSelect a language.
    FieldInstructions
    DefinitionType all or part of the definition. (To adjust search scope, click the Advanced Filter icon.)
    Definition TypeSelect a definition type.
    ContextSelect one or more contexts. 
    LanguageSelect a language.
    FieldInstructions
    PrimarySpecify whether the associated concept is primary (Yes) or not (No). 
    ConceptSelect one or more concepts. 
    Concept DefinitionType all or part of the concept definition. 
    Integer ValueSpecify all or part of the integer value. You can specify part of the value because this field is actually a text field. For example, if you specify "20" in this field and if items exist with "120" or ">=200", the system returns those items. (To adjust search scope, click the Advanced Filter icon.)
    FieldInstructions
    CS|CSISelect one or more classification schemes or classification scheme items.
    CS ContextType all or part of the classification scheme context.
    CS Long NameType all or part of the classification scheme long name. (To adjust search scope, click the Advanced Filter icon.)
    Enter Search StringEnter a search string, complete or partial. This field searches CS Long Name and CSI Long Name. (To adjust search scope, click the Advanced Filter icon.)
    FieldInstructions
    Permissible ValueEnter a permissible value to return a list of data elements based on or limited to that permissible value. (To adjust search scope, click the Advanced Filter icon.)
    Value MeaningType all or part of a value meaning. (To adjust search scope, click the Advanced Filter icon.)
    Concept CodesType all or part of a concept code. 
    VM DescriptionType all or part of value meaning description. 
    PV Parent ConceptSelect one or more permissible value parent concepts. 
    Enter Search StringEnter a search string, complete or partial. This field searches VM Long Name or VM Description. (To adjust search scope, click the Advanced Filter icon.)
    FieldInstructions
    Permissible ValueType all or part of a permissible value. 
    Value MeaningType all or part of a value meaning.
    VM Alternate NameType all or part of a value meaning alternate name. (To adjust search scope, click the Advanced Filter icon.)
    Name TypeSelect one or more name types. 
    ContextType all or part of a context. (To adjust search scope, click the Advanced Filter icon.)
    LanguageSelect a language. 
    FieldInstructions
    Permissible ValueType all or part of a permissible value. (To adjust search scope, click the Advanced Filter icon.)
    Value MeaningType all or part of a value meaning. (To adjust search scope, click the Advanced Filter icon.)
    VM Public IDEnter a value meaning public ID.
    VM Alternate DefinitionType all or part of a value meaning alternate definition. (To adjust search scope, click the Advanced Filter icon.)
    Definition TypeSelect one or more definition types.
    ContextSelect one or more contexts. 
    FieldInstructions
    FormSelect one or more forms. 
    Module NameType all or part of a module name. (To adjust search scope, click the Advanced Filter icon.)
    FieldInstructions
    Document NameType all or part of a reference document name. (To adjust search scope, click the Advanced Filter icon.)
    Document TypeSelect one or more reference document types.
    Document TextType all or part of a reference document text. (To adjust search scope, click the Advanced Filter icon.)
    ContextSelect one or more contexts.
    LanguageSelect a language.
    Enter Search StringEnter a search string, complete or partial. This field searches Document Name and Document Text. (To adjust search scope, click the Advanced Filter icon.)
    FieldInstructions
    Component CDESelect one or more component CDEs.
    Component CDE Public IDEnter a component CDE public ID.

    (To view all derived data elements, select the Derivation Components child filter, leave all fields blank, and click Apply Filter.)

    This child filter is available only for Data Elements - View/Browse. 

    FieldInstructions
    Owned By or Used By ContextSelect one or more contexts. Data elements are owned by the context that has administrative authority to edit and update them. In addition to the owning context however, a data element can be designated for use by another non-owning context. 
    FieldInstructions
    DEC Long NameEnter a keyword to return CDEs with the specified data element concepts. (To adjust search scope, click the Advanced Filter icon.)
    DEC Public IDEnter a data element concept public ID.
    VD Long NameType all or part of the value domain long name. (To adjust search scope, click the Advanced Filter icon.)
    VD Public IDEnter a value domain public ID.
    Derived DESpecify whether the data element is derived (Yes) or not (No).
    Derivation TypeSelect a derivation type.
    VD Maximum LengthSpecify the value domain maximum length. (To adjust search scope, click the Advanced Filter icon.)
    VD Minimum LengthSpecify the value domain minimum length. (To adjust search scope, click the Advanced Filter icon.)
    VD TypeSpecify whether to search for an Enumerated or Non-Enumerated value domain. To search for both, clear this field. (That is, set it to Select a Value.)  
    VD Display FormatSelect a value domain display format. 
    Unit of MeasureSelect a unit of measure.
    Source Data TypeSelect a source data type.
    Standard Data TypeSelect a standard data type.
    Object Class Long NameEnter a keyword to return CDEs with the specified object class name. (To adjust search scope, click the Advanced Filter icon.)
    Property Long NameEnter a keyword to return CDEs with the specified property name. (To adjust search scope, click the Advanced Filter icon.)
    Object Class Concept CodesType all or part of the object class concept code.
    Property Concept CodesType all or part of the property concept code.
  10. Click Apply Filter. The system displays the search results. By default, the system also hides the search criteria.

At this point, you have the following choices:

  • To compare two or more data elements, select the rows of interest and click Compare CDE. The Data Element Compare page appears. 
  • To compare permissible values in two or more data elements, select the rows of interest and click Compare PV. The Permissible Value Comparison page appears. 
  • To view details about a data element, click the value in the CDE Long Name column. 

  • No labels