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Tool Overview
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caNanoLab provides access to information on:
- Nanotechnology protocols in biomedicine
- Composition of nanomaterials
- Functions of nanomaterials (for example, therapeutic, targeting, diagnostic imaging)
- Physico-chemical characterizations including size, molecular weight, shape, physical state, surface chemistry, purity, solubility, and relaxivity
- In Vitro characterizations such as cytotoxicity, blood contact properties, oxidative stress, and immune cell functions
- Publications and reports from nanotechnology studies in biomedicine
caNanoLab was developed as a collaboration between the NCI Center for Biomedical Informatics and Information Technology (CBIIT),
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the NCI Nanotechnology Characterization Laboratory (NCL), and
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caNanoLab and Standards Development
The caNanoLab project is actively involved in a variety of efforts supporting the development of standards for representing nanomaterials and their characterizations as applied to the field of nanomedicine. The caNanoLab project participates in the caBIG® Integrative Cancer Research (ICR) Nanotechnology Working Group (Nano WG) which is chartered to integrate nanotechnology information and tools to aid discovery and clinical translation in the cancer research community leveraging caBIG infrastructure components. The primary objectives of the caBIG ICR Nano WG are to:
- Define and prioritize development and governance needs for the cancer nanotechnology ontology
- Adopt and collect data sharing standards and protocols for cancer nanotechnology data
- Develop a vision for nanoinformatics enabling information exchange with nanotechnology resources using
The caNanoLab project participates in working group objectives by assisting in the development of nanotechnology standards and the application of these standards in the caNanoLab nanotechnology resource. Information on caBIG ICR Nano WG standards leveraged by caNanoLab are provided in the subsections below.
Nanotechnology Data Sharing Standards
caNanoLab Users Group
caNanoLab is currently deployed at the NCL, Washington University, Stanford, and George Tech. Future caNanoLab feature requests are obtained by working with the nanotechnology community through the caNanoLab Users Group and the caBIG Integrative Cancer Research (ICR) Nanotechnology (Nano) Working Group. The caBIG ICR Nano Working group is aimed at developing a vision for nanoinformatics and is composed of members from the NCL, CCNEs, and other members of the nanoinformatics community.
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the NCI Office of Cancer Nanotechnology Research (OCNR).
Data Curation
Data curation is a key component for ensuring that data is appropriately annotated to facilitate data sharing in a semantically interoperable fashion. Data curation activities on caNanoLab are currently performed by
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the NCI Alliance for Nanotechnology in Cancer Data Coordinators and the NCI data curator. Data curators assist in extracting data from publications and nanotechnology experiments, annotating extracted data, and providing overall data quality control. If you are interested in
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submitting your data into caNanoLab,
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contact caNanoLab-Support@ISB-CGC.org.
Detailed data curation steps are explained in the Curation of Biomedical Data into ISA-TAB-Nano and caNanoLab Standard Operating Procedure.
Installation and Downloads
caNanoLab 3.1.14 Artifacts
- https://github.com/isb-cgc/cananolab/releases/tag/3.1.14
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caNanoLab 3.1.13 Artifacts
- https://github.com/isb-cgc/cananolab/releases/tag/3.1.13
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caNanoLab 3.1.12 Artifacts
- https://github.com/isb-cgc/cananolab/releases/tag/3.1.12
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caNanoLab 3.1.11 Artifacts
- https://github.com/isb-cgc/cananolab/releases/tag/3.1.11
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caNanoLab 3.1.10 Artifacts
- https://github.com/isb-cgc/cananolab/releases/tag/3.1.10
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caNanoLab 3.1.9 Artifacts
- https://github.com/isb-cgc/cananolab/releases/tag/3.1.9
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caNanoLab 3.1.8 Artifacts
- https://github.com/isb-cgc/cananolab/releases/tag/3.1.8
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caNanoLab 3.1.7 Artifacts
- https://github.com/isb-cgc/cananolab/releases/tag/3.1.7
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caNanoLab 3.1.6 Artifacts
- https://github.com/isb-cgc/cananolab/releases/tag/3.1.6
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caNanoLab 3.1.5 Artifacts
- https://github.com/isb-cgc/cananolab/releases/tag/3.1.5
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caNanoLab 3.1.4 Artifacts
- https://github.com/isb-cgc/cananolab/releases/tag/3.1.4
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caNanoLab 3.1.3 Artifacts
- https://github.com/isb-cgc/cananolab/releases/tag/3.1.3
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caNanoLab 3.1.2 Artifacts
- https://github.com/isb-cgc/cananolab/releases/tag/3.1.2
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caNanoLab 3.1.1 Artifacts
- https://github.com/isb-cgc/cananolab/releases/tag/3.1.1
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caNanoLab 3.1.0 Artifacts
- https://github.com/isb-cgc/cananolab/releases/tag/v3.1
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caNanoLab 3.0 Artifacts
- cananolab-3.0.0-it10.zip
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caNanoLab 2.4.1 Artifacts
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caNanoLab 2.4 Artifacts
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caNanoLab 2.3.11 Artifacts
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Forum and Support
- caNanoLab User Forum
- Forum for recommending caNanoLab enhancementsMultiexcerpt include MultiExcerptName ExitDisclaimer nopanel true PageWithExcerpt wikicontent:Exit Disclaimer to Include - Application Support: caNanoLab-Support@ISB-CGC.org
Presentations, Demos and Other Materials
The caNanoLab Data Submission Video and accompanying transcript is available to assist people in submitting data in caNanoLab.
Note: Materials for previous caNanoLab releases are available from the caNanoLab Presentations, Demos and Other Materials archive.
Documentation and Training
To access online help in the application, click the Help button.
- caNanoLab User's Guide
- caNanoLab FAQ
- caNanoLab Release Notes
- caNanoLab Installation Guides
- caNanoLab Software License
Note: Documents for previous caNanoLab releases are available from the caNanoLab Presentations, Demos and Other Materials Archive and the Docs Archive Page - calab.
Related Tools and Terminology
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Using the caNanoLab Wiki
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