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Contents of this Page

Note

This page outlines the semantic infrastructure elicitation of requirements from 2009 and early 2010 and was last updated in August, 2010. The Semantic Infrastructure Roadmap is the next phase of evolution of CBIIT Semantic Infrastructure planning.

This page is the master list for organizing stakeholder business requirements for the existing semantic infrastructure, that may impact the new CBIIT semantic infrastructure roadmap. The Semantic Infrastructure Roadmap replaces the 2009 Semantic Infrastructure Concept of Operations. Any requests which do not fit into the seven initiatives described by the Semantic Infrastructure Concept of Operations were also documented. After collection of more details on all the requirements, a UML Model depicting the high level technical service requirements and their decomposed use cases was developed.

historical link: https://wiki.nci.nih.gov/download/attachments/20285848/10_06_17_UMLofREQUIREMENTS.pdf

To communicate requirements for the existing infrastructure not listed here, the contact was Denise Warzel. For requirements pertaining to the new CBIIT semantic infrastructure, the contact was Dave Hau. For semantic infrastructure requirements for caEHR, the contact was John Speakman.

Links to Related Pages

Explanation of Columns in the Requirements Master List

  • Infrastructure
    • IS09 Validation - The Validation service verifies structural and semantic consistency across messages used in interoperability scenarios.
    • IS10 Transformation - The Transformation service provides a functional end point to manage and enact mappings between syntactically disparate information types.
    • IS11 Knowledge Management - Knowledge Management service represents a series of capabilities around the storage, versioning, searching, discovery, and expression of the semantics supporting key capabilities.
    • IS12 Service Contract Management - Service Contract Management service represents a series of capabilities around the storage, versioning, searching, discovery and expression of the contract semantics supporting interoperability.
    • IS13 Enterprise Vocabulary - Enterprise Vocabulary services support the management, storage, and mapping of terminologies and value sets.
  • Topic - is the forum topic title from the request: Spring Requirements Forum, Winter Requirements Forum or a title given to a request that came directly from a customer or stakeholder.
  • Submitter - is the stakeholder requesting the new feature or work. Email links are provided for historical purposes.
  • Requirement Statement (author) - is the person initiating the process whether pulling information from the forums or receiving requests from stakeholders
  • Interview Analyst - is the person in direct contact with the submitter in order to extract requirements.
  • Use Case Analyst - is the person taking the requirements in order to create use cases.
  • Phase 1 Target - the goal to be achieved in phase 1
  • Requirement Link(s) - artifacts created during the requirements process
  • Notes - notes related to this requirement

The following table contains the Requirements Master List. Click the text in the header to sort the column.

Requirements Master List

Topic

Infrastructure Service

Type

Submitter

Req Statement

Interview Analyst

Use Case Analyst

Phase I Target

Requirement Link(s)

Notes

21090 Datatype Support

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Christo Andonyadis

Patrick

---

---

Formal Requirements Statement, Summary Use Cases

Requirements Input - Init1pm16 (ISO 21090)
Use Cases - Init1pm16.u (ISO 21090)

Services for data integration
caBIG Community - (Avinash Shanbhag CBITT Leader)

Ability to share a link to a CDE

Knowledge Management

Manage & Create Model Metadata

Konrad Rokicki

Baris

n/a

Patrick

Formal Requirement Statement and Use Case Summary

Requirements Input - Init1bes10
Use Cases - Init1bes10.pm17

This feature already exists, clarify use cases to ensure that all are supported
Retrieving Content for CDEs

Ad Hoc Reporting features

Knowledge Management

Manage & Create Model Metadata

Denise Warzel

Shantanu

n/a

---

Summary Requirements statement

Requirements Input - Init1sd15

Provide ability to generate customized reports from metadata content

Allow users to bulk load unannotated content to MDR

Knowledge Management

Manage & Create Model Metadata

Denise Warzel Dianne Reeves

Baris

Baris

---

Formal Requirements Statement

Requirements Input - Init1bes13

Models

Automate

Knowledge Management

Manage & Create Model Metadata

Sal Mungal

Patrick

n/a

Patrick

Formal Requirements Statement and 2-4 Summary Use Cases

Requirements Input - Init1pm9
Use Cases - Init1pm9.pm16 - Automate
Use Cases - Init1pm7.SD200-Automate caDSR model submission
Use Cases - Otherhm2.pm13 - Conditional CDEs

Automate creating CDEs from skip patterns of Forms, workflow to automate annotation and loading of Models

Automate & Streamline caDSR Model Submission Process

Knowledge Management

Manage & Create Model Metadata

Bilal Elahi

Patrick

n/a

Shantanu

Formal Requirements Statement and 2-4 Use Cases

Requirements Input - Init1pm7
Use Cases - Init1pm7.SD200.u

support end-to-end annotation and loading of models, traceability; the need to submit a model to be loaded by someone else may go away; this could be a short term solution, depending on LOE to implement

Automate Loading process:

Knowledge Management

Manage & Create Model Metadata

Ashwin Mathur

Patrick

n/a

Shantanu

Formal Requirements Statement and 2-4 Use Cases

Requirements Input - Init1pm6
Use Cases - Init1SDpm6.100.u

Models

Best Practices for Using Standardized/Preferred Relations

Constraint

Supplemental Specification Requirement on Ontology Best Practices

Jyoti Pathak

Shantanu

Shantanu

---

Formal Requirements Statement

Requirements Input - Init5sd9

---

Brain Tumor in silico study: Pathology/Radiology data models

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Joel Saltz

Patrick

Shantanu

Shantanu

 

Requirements Input - Init6pm23
Use Cases - Init6pm23.u

Integration Use Cases

caBIG Rules Engine White Paper v4

historical link https://wiki.nci.nih.gov/download/attachments/20285848/caBIG_Rules_Engine_WP_v4.doc

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Joel Saltz

---

---

---

Formal Requirements Statement

---

---

caDSR or rather MDR requirements

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Hannes Niedner

Patrick

Hua

---

Formal Requirements Statement

Requirements Input - Init1pm12

Services

caEHR Content Development

NA

No Requirement Specified

Gilberto Fragoso
Kevin Hurley

Patrick

---

Patrick

Formal Requirement Statement and Use Cases

---

caBIG Community

caEHR SI Services

NA

No Requirement Specified

Gilberto Fragoso
Kevin Hurley

Patrick

---

Patrick

Formal Requirement Statement and prioritized use cases

---

caBIG Community

Canada Infoway Clinical Concept Representation

No Clear Requirement Defined.

Discussion presentation on identifying Clinical Concepts through use of HL7 and Clinician Feedback.

Mark Shafarman, Bill Gilliam

---

---

---

Formal Requirements Statement, high level use cases

---

Canada Infoway Clinical Concept ppt

cancerGrid Federated Registries

Constraint

Supplement Specification Req. for Federated MDRs

Steve Harris

---

---

---

Formal Requirements Statement; Summary of Services Use Cases (see Michael Riben)

---

caBIG Stakeholders - 11179 and Forms metadata exchange

CDE service to return enumerations by reference

Vocabulary Management
Knowledge Management

Manage & Create Model Metadata

Christo Andonyadis

Hua

Hua

Patrick

Formal Requirements Statement, Summary Use Cases

Requirements Input - Init1hm6
Use Cases - Init1hm6.pm18

---

CDE versions, timestamps and other metrics

Knowledge Management

Manage & Create Model Metadata

Sal Mungal

Baris

Baris

Patrick

Formal Requirements Statement

Requirements Input - Init1bes6

Display usage information in browsers, use this to organize search results

CDEs from Man. curation, UML models and CRFs

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Brian Davis Tommie Curtis

Baris

n/a

Patrick

Formal Requirements Statement

Requirements Input - Init1bes9
Use Case - Init1bes9.pm11

leverage semantics of existing content to find/reuse content from different sources to create Forms

CDISC SHARE

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Margaret Haber

Baris

---

---

Formal Requirements Statement

Requirements Input - Otherdbw1

caBIG Stakeholder

Clarification of the model madness, please

Constraint

Supplemental Specifications Requirement, build a Glossary of Model Terms

Hannes Niedner

Shantanu

Hua

---

Formal Requirements Statement

Requirements Input - Init6sd10

---

Compare Semantic data

Knowledge Management

Manage & Create Model Metadata

Tejas Dave

Baris

Baris

Patrick

Formal Requirements Statement and Use Case Summary

Requirements Input - Init1bes1 Use Cases - Init1bes1.pm9

Ability to compare Object Classes, Models, etc.

Conditional CDEs

Knowledge Management

Manage & Create Model Metadata

Sal Mungal

Hua

Baris

Patrick

Formal Requirements Statement

Requirements Input - Otherhm2
Use Cases - Otherhm2.pm13

---

Conformance Profile Browser

Knowledge Management

Manage & Create Model Metadata

John Koisch
Paul Boyes
Linda Schmandt

Baris

---

---

---

Requirements Input - Init3bes16

caBIG Community - Support for ECCF Use Cases

Conformance Profile Editor

Knowledge Management

Manage & Create Model Metadata

John Koisch
Paul Boyes

Baris

---

---

---

Requirements Input - Init3bes18

caBIG Community - Support for ECCF Use Cases

Conformance Profile Registry (or Repository) and Format

Knowledge Management

Manage & Create Model Metadata

John Koisch
Paul Boyes

Baris

---

---

---

Requirements Input - Init3bes17

caBIG Community - Support for ECCF Use Cases

Conformance Profiles

Knowledge Management

Manage & Create Model Metadata

Frank Hartel interview:
John Koisch
Paul Boyes

Baris

Baris

---

Formal Requirements Statement and summary of high level use cases (actor, bus goal, success scenario)

Requirements Input - Init3bes14

caBIG Community - Support for ECCF Use CasesArch WS Presentation

Contractor and Software Vendor Application Development Support

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Patrick McConnell

Denise

---

---

Formal Requirements Statement

Requirements Input - Init1dbw8

Application Engineering

CQL 2.0 Enhancements

Knowledge Management
Transformation

Manage & Create Model Metadata
Search Models

Todd Parnell

Shantanu

n/a

Patrick

Decomposed forum and other materials

Requirements Input - Init1sd2
Use Cases - INIT1SD2.pm7

caB2B use cases for improving metadata for services

Cross-cutting semantic searches

Knowledge Management
Enterprise Vocabulary

Align Models

Tejas Dave

Patrick

---

Patrick

Formal Requirements Statement

Requirements Input - Init1pm4

leverage searches across EVS and caDSR

CTMS Interoperability Scenarios: Maximize reuse, Minimize development

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Christo Andonyadis

Denise

---

---

Formal Requirements Statement

Requirements Input - Otherdbw2

CTMS Application Engineering
CTMS Interoperability Scenarios

Curator Harmonization Activities

Knowledge Management

Manage & Create Model Metadata
Search Models

Tommie Curtis

Denise

---

---

Formal Requirements Statement, high level use cases

Requirements Input - Init1dbw12

---

Customizable Download

Knowledge Management

Manage & Create Model Metadata

Bilal Elahi

Baris

n/a

---

---

Requirements Input - Init1bes3(UCD)

allow users to search for and customize download, not just CDEs

Data rollback functionality

Knowledge Management

Manage & Create Model Metadata

Ashwin Mathur

Patrick

n/a

Shantanu

Formal Requirements Statement and 2-4 Detailed use cases

Requirements Input - Init1pm5
Use Cases - Init1pm5.u

Models

Debugging of Terminology Mappings

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Jyoti Pathak

Patrick

n/a

Shantanu

Formal Requirements Statement

Requirements Input - Init5pm21

 

Downloading all CDEs

Knowledge Management

Manage & Create Model Metadata

Sal Mungal Tejas Dave

Baris

Baris

---

Formal Requirements Statement

Requirements Input - Init1bes2

Allow federation of content, current limitation of what can be extracted/easily downloaded

Dynamic CDE Browser

Knowledge Management

Manage & Create Model Metadata

Sal Mungal

Baris

Baris

---

Formal Requirement Statement and Draft list of prioritized use cases

Requirements Input - Init1bes7

Adjustable UI for the user to customize views of metadata

Enabling AutoCompletion In Creating Ontologies

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Jyoti Pathak

Shantanu

Shantanu

---

Formal Requirements Statement

Requirements Input - Init6sd7

---

Expose underlying Tool functionality as Services

Knowledge Management

Manage & Create Model Metadata

Tejas Dave

Patrick

n/a

Patrick

Formal Requirements Statement

Requirements Input - Init1pm10
Use Cases - Init1pm10.pm20

Examples of High Level Services for retrieving MDR content, caDSR Services Wiki

Extend terminology development to new populations/missions

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Daniela Smith

Shantanu

---

---

Formal Requirements Statement

Requirements Input - Init6sd11

---

FDA

NA

No Requirement Specified

Margaret Haber

---

---

---

Formal Requirements Statement

---

caBIG

Federated Data w/single source of 'truth'

Knowledge Management

Manage & Create Model Metadata

John Speakman

Denise

---

---

Formal Requirements Statement

Requirements Input - Otherdbw4

Ability to have data spread over the grid/internet, but know which data is the original, source of truth

Federated Metadata Registries

No Requirement Defined, Most likely a design constraint

Requirement for Federated MDRs captured in the Supplemental Specifications

Saurin Mehta

Denise

---

---

Formal Requirements Statement, high level use cases

---

Novartis MDR

Formal representation of policies and regulations

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Hannes Niedner

Shantanu

---

---

Formal Requirements Statement

Requirements Input - Init3sd1

---

Generation of Forms

Knowledge Management

Manage & Create Model Metadata

Sal Mungal

Hua

n/a

Patrick

Formal Requirements Statement; High level use cases for Services

Requirements Input - Otherhm1
Use Cases - Otherhm1.pm12

Related to Christo Andonyadis requirements - See 8 Other

Harmonize and reuse metadata across different terminologies

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Dianne Reeves

Denise

---

---

Formal Requirements Statement and Use Cases

Requirements Input - Init1dbw11

---

HHS OS - Data.gov

NA

Some References to Linked Data and Cloud Computing, but no clear KR Requirement.

George Thomas

---

---

---

Formal Requirements Statement, high level use cases

---

ppt links
semantic.data.gov discussion

HL7 MDR Requirements

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Margaret Haber

Baris

---

---

Formal Requirements Statement and High level/priority Use Cases

Requirements Input - Init1dbw3

HL7 CIC; caBIG Stakeholder

HL7 v3 data types

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Frank Hartel

Patrick

---

---

See 21090 Datatype Support

Requirements Input - Init1pm16 (ISO 21090)
Use Cases - Init1pm16.u (ISO 21090)

Services for data integration

ICR IRWG requirements

  • caGrid querying

Knowledge Management

Search Models

Robert Freimuth

Shantanu

---

---

Formal Requirements Statement

Requirements Input - Init4sd16

caGrid querying

ICR IRWG requirements

  • cde-cde and metadata mapping

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Robert Freimuth

Shantanu

---

---

Formal Requirements Statement

Requirements Input - Init1sd20

provide capabilities to build cde-cde mapping and metadata mapping for use in services

ICR IRWG requirements

  • metamodel for LIMS

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Robert Freimuth

Shantanu

---

---

Formal Requirements Statement C - Decomposed forum and other materials

Requirements Input - Init6sd30

metamodel for LIMS

ICR IRWG Requirements

  • model loading

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Robert Freimuth

Patrick

n/a

Patrick

Formal Requirements Statement; Summary Use Cases

Requirements Input - Init1pm1
Use Cases - Init1bes1.pm1

Integrated tools for model loading, traceability

ICR IRWG requirements

  • models and algorithms

Knowledge Management

Manage & Create Model Metadata

Robert Freimuth

Hua

Hua

Patrick

Formal Requirements Statement and Use Case Summary

Requirements Input - Init1hm1

Make it easier to reuse/map CDEs to models, improve matching algorithms

ICR-caIntegrator2

Knowledge Management
Enterprise Vocabulary

Align Models

Juli Klemm
Anand Basu

Shantanu

n/a

Patrick

Formal Requirement Statement and Draft prioritized use cases

Requirements Statement - Init1pm24
Use Cases - Init1pm24.pm15

Related to dynamic extensions

ICRi WG Use Case Scenarios

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Juli Klemm

Denise

---

Baris

Formal Requirements Statement; Detailed Use Cases in Round 4

Requirements Input - Otherdbw5

LS and CS Governance [Life Sciences "grid" vsd]
ICRi WG Use Case Scenarios
LS Activities

Improve Semantic Query Mechanism

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Christophe Ludet

Hua

---

Patrick

Formal Requirements Statement

Requirements Input - Init1hm3

leverage semantic connections and NLP for searching/identifying reusable content

Integrate all caDSR tools

Knowledge Management

Manage & Create Model Metadata

Ashwin Mathur

Baris

n/a

---

Formal Requirements Statement

Requirements Input - Init1bes5

Portal that integrates tools

Integrated CDE Tool

Knowledge Management

Manage & Create Model Metadata

Sal Mungal

Baris

Baris

---

Formal Requirements Statement

Requirements Input - Init1bes6

makes easier to use tools in a workflow, expose more metadata

Integration of LexEVS valuesets management with LexWiki

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Guoqian Jiang

Hua

---

---

Formal Requirements Statement

Requirements Input - Init5hm1

---

Integration of multiple terminologies

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Hannes Niedner

Patrick

---

---

Formal Requirements Statement

Requirements Input - Init5pm22

---

Interoperate on Address using ISO 21090 datatypes

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Sal Mungal

Patrick

n/a

---

See 21090 Datatype Support Use Cases

Requirements Input - Init1pm16 (ISO 21090)
Use Cases - Init1pm16.u (ISO 21090)

Services for data integration

LexEVS "Portal" for use by other apps

Knowledge Management

Search Models

Dave Hau

---

---

---

---

--

caBIO Portlet
caBIO Portlet instance
Example Search to Find Gene Associated with Disease

LexEVS Enhancements

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Craig Stancl

---

---

---

Formal Requirements Statement

---

---

LexEVS Enhancements based on CTS 2 Service Functional Model

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Craig Stancl

Baris

---

Patrick

Formal Requirements Statement

---

CTS2 SFM DSTU Final 20090322

historical link: https://wiki.nci.nih.gov/download/attachments/20285848/CTS+2+SFM+DSTU+FINAL+20090322_v1+1_addenda001.doc

LEXEvs: capture the need for new content development in NCI Thesaurus

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Larry Wright

---

---

---

Formal Requirements Statement

---

---

LexWiki enhancement

Knowledge Management

Model Administration

Guoqian Jiang

Hua

Hua

---

Formal Requirements Statement

Requirements Input - Init4hm1

---

LexWiki Tooling versioning management and upgrade mechanism

Knowledge Management

Model Administration

Guoqian Jiang

Patrick

---

---

Formal Requirements Statement and 2-3 Summary Use Cases

Requirements Input - Init5pm20

---

LS and CS Business Architecture Modeling Use Cases

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Juli Klemm

Denise

---

---

Formal Requirements Statement

---

Life Sciences and Clinical Sciences Governance

LS DAM refinement and utilization

Knowledge Management / Transformation
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Frank Hartel

Patrick

---

Patrick

Formal Requirements statement; Summary Use Cases

Requirements Input - Init1pm11
Use Cases - Init1pm11.pm3

Services

Mapping/transformation support for ISO21090 data types

Knowledge Management /Transformation
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Baris Suzek

Baris

n/a

Patrick

Formal Requirements Statement

Requirements Input - Init1bes12
Use Cases - Init1pm16.pm4 (ISO 21090)

Services for data integration

MD Anderson Federated Registries

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Michael Riben

Patrick

---

---

---

Requirements Input - Init1dbw4

caBIG Community

Medidata

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Christo Andonyadis

Patrick

n/a

Patrick

---

Requirements Input - Init1pm13
Use Cases - Init1pm13.pm14

Commercial COTS vendors - Form and CDE Services - CTMS WS

Metadata repositories should contain corresponding metadata

Knowledge Management

Manage & Create Model Metadata

Baris Suzek

---

---

---

Formal Requirements Statement

---

Guide to Mentors

NCI level vocabulary services for Diseases and Interventions

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Christo Andonyadis

Hua

n/a

Patrick

Formal Requirements Statement

Requirements Input - Init1hm2
Use Cases - init1hm2.pm22

---

Need for a Content Driven (Clinician Friendly) Browser

Knowledge Management

Manage & Create Model Metadata

Bilal Elahi

Patrick

n/a

Shantanu

Formal Requirements Statement; Develop summary list of use cases (Most common queries)

Requirements Input - Init1pm2

Easier to use Browser - User Centered Design details attached

NLP Integration

Knowledge Management

Search Models

Sharon Gaheen

Shantanu

n/a

 

Formal Requirements Statement

Requirements Input - Init4sd8

---

Ontology enabled indexing of literature

Knowledge Management/Transformation
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Frank Hartel

Shantanu

n/a

Patrick

Formal Requirements Template Decomposed forum and other materials

Requirements Input - Init1sd13
Use Cases - INIT1SD13.pm23

---

Policies/protocols that will ensure concurrent registration of model/metadata

Knowledge Management /Transformation

Manage & Create Model Metadata

Baris Suzek

---

---

---

Formal Requirements Statement

---

Guide to Mentors

Programmatic access to 'Materials and Methods' section of a paper

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Ian Fore

Denise

 

Patrick

Formal Requirements Statement

Requirements Input - Otherdbw3
Use Cases - Otherdbw3.pm23

Similar to Yolanda's semantic workflows

RDF triple store backend for LexEVS

Knowledge Management

Manage & Create Model Metadata
Search Models

Cui Tao

Hua

Hua

Shantanu

Formal Requirements Statement

Requirements Input - Init4hm1
Use case - Init4hm1.SD210

---

Registration of Models in GME

Knowledge Management

Manage & Create Model Metadata
Search Models

Tony Pan

Baris

n/a

 

Formal Requirements Statement and Use Cases

Requirements Input - Init8bes15

---

reqs sharing (Support metadata for Statistical Practice)

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Sue Dubman

Shantanu

---

Shantanu

Formal Requirements Statement;

Requirements Input - Init1SD40

Genzyme - Will be handled by CBIIT Team Statistical Practice Article

historical link: https://wiki.nci.nih.gov/download/attachments/20285848/04-DIJ44%281%29+2459+qxd.pdf

Reuse of metadata

Knowledge Management
Enterprise Vocabulary

Align Models

Sal Mungal

Hua

Baris

Patrick

Formal Requirements Statement

Requirements Input - Init1hm4

leverage semantic metadata and model relationship to find/reuse content

Reuse or create new data elements at runtime

Knowledge Management

Manage & Create Model Metadata

Juli Klemm

Hua

Hua

Patrick

Formal Requirement Statement and Use Cases Summary (List)

Requirements Input - Init1hm2
Use Cases - Init1hm2.pm6

related to metadata for caB2B and Dynamic Extensions Services

Rules/OWL2 Based Inferencing

NA

No Requirement Specified

Cecil Lynch

---

---

---

Formal Requirements Statement

---

---

Seamless integration of Data and Services through workflows

Knowledge Management

Manage & Create Model Metadata
Search Models

Anand Basu

Denise

---

C - CBIIT Interview

Formal Requirements Statement

Requirements Input - Otherdbw7

Application Engineering

Search for semantics from different View points

Knowledge Management
Enterprise Vocabulary

Align Models

Brian Davis

Patrick

---

Patrick

Formal Requirements Statement

Requirements Input - Init1pm3

leverage semantic connections to help users find existing content when browsing or searching; Model repository; Point-of-View browsing

Semantic integration with external communities

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Frank Hartel

Patrick

---

---

Formal Requirements Statement

Requirements Input - Init4pm18

---

Semantic web vs grid tools

Not Defined

---

Sal Mungal

---

---

---

Formal Requirements Statement

---

---

Simplify and streamline recording data semantics

Knowledge Management
Environmental Vocabulary

Manage & Create Model Metadata
Align Models

Denise Warzel

Patrick

n/a

Shantanu

Formal Requirements Statement; Summary Use Cases

Requirements Input - Init1pm8

Better support for annotating and loading models

SIW Enhancement/Model Validation

Validation
Enterprise Vocabulary

part of Manage & Create Metadata
Align Models

Sharon Gaheen
Sal Mungal

Baris

Baris

Patrick

Formal Requirements Statement and Use Case Summary

Requirements Input - Init1bes4
Requirements Input - Init3bes20
Use Cases - Init1bes4.pm10
Circular References

This set of requirements and use cases is for the ability to validate models against standard models and best practices, such as checking models for cyclic references. It may or may not end up as an SIW enhancement.

SIW: CDE - ObjectClass interdependency

Knowledge Management

Manage & Create Model Metadata

Hannes Niedner

Baris

 

Patrick

Formal Requirements Statement

Requirements Input - Init1bes8

Need to be able to register java classes that are comprised of CDEs that are associated with different Object Classes - remove the one domain class<->one object class limitation for model registration

SPARQL Endpoint for LexEVS

Knowledge Management

Manage & Create Model Metadata

Jyoti Pathak

---

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Formal Requirements Statement

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Standardized annotations of UML associations names/concepts

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Brian Davis

Shantanu

n/a

Shantanu

Formal Requirements Statement; Develop Use Case for how user envisions this would work.

Requirements Input - Init1sd6

The capability to annotate associations already exists in caDSR. Needs to be incorporated into overall semantic annotations, but more easily than current methods.

Support caB2B Services to integrate data on grid

Knowledge Management
Enterprise Vocabulary Transformation

Manage & Create Model Metadata
Align Models

Sal Mungal

Denise

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Mohamed Patrick

Formal Requirements Statement

Requirements Input - Init1dbw6
Use Cases - Init1dbw6.pm8

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Support for .NET tools

Constraint

Supplementary Specificagtion - use of .NET tools

Tracy Safran

Patrick

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Formal Requirements Statement

Requirements Input - Init1pm15

Services

Support for Curation Workflow Activities

No Requirement defined, most likely it is
Knowledge Management

Manage & Create Model Metadata

Saurin Mehta

Denise

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Formal Requirements Statement, high level use cases

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Novartis curator support

Support for Knowledge Management to Discoveries: Scientific Workflows and Artificial Intelligence

Knowledge Management /Transformation
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Yolanda Gil

Denise

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Patrick

Formal Requirements Statement, 2-4 Use Cases

Requirements Input - Init3dbw2
Use Case Statements - Init3dbw2.pm21

Wings Semantic Workflows Requirements for caBIG Infrastructure to Support Semantic Workflows; Recommendations for caBIG to Support Semantic Workflows; Use Cases for Semantic Workflows in caBIG

historical links: https://wiki.nci.nih.gov/download/attachments/20285848/Requs_caBIG_InfrastructureSupportSWorkflow.ppt and https://wiki.nci.nih.gov/download/attachments/20285848/Recommendations_caBIG_SupportSemWorkf.ppt and https://wiki.nci.nih.gov/download/attachments/20285848/UseCasesForSemanticWorklowIncaBIG.doc

Support for Reusable Modules/Sections of Forms

Knowledge Management

Manage & Create Model Metadata

Dianne Reeves

Denise

n/a

Patrick

Formal Requirements Statement; High level use cases for Services

Use Cases - Init8pm25.pm24

Make Form Modules reusable

Support for Structured Eligibility

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Search Models
Align Models

Christo Andonyadis

Denise

Patrick

Patrick

Formal Requirement Statement and Use Cases Summary

Requirements Input - Init1dbw7
Use Cases - Init1dbw7.pm19

caBIG Community

Support for use of Semantic Web Technologies in caBIG

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Joshua Phillips

Patrick

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---

Requirements Input - Init4pm19

Semantic Web Applications to CTMS Use Cases

Tagging and availability of VCDE approved terminologies

Enterprise Vocabulary

Align Models

Elizabeth Hahn-Dantona

Hua

Hua

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Formal Requirements Statement

Requirements Input - Init1hm5

Make all VCDE approved terminologies available for model annotations

TCGA AIM-E Integration Use Cases

Knowledge Management

Manage & Create Model Metadata
Search Models

Tony Pan
Daniel Rubin
Paul Mulhern

Shantanu

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Shantanu

Formal Requirements Statement and Use Cases

Requirements Input - InitotherSD75

This project's aim is to enable the creation of radiology data in a standardized manner, and to allow for the integration of this data with genomic and clinical dataTCGA AIM-E Enterprise Use Cases TCGA AIM Data Service Directors Brief Oct 2009 Wiki Overview of Architectural and Ontological Issues in Quantitative Imaging presentation Imaging Use Case - Cooperative Group Support

Testing conformance with conformance profiles

Knowledge Management

Manage & Create Model Metadata

John Koisch
Paul Boyes
Linda Schmandt

Baris

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Requirements Input - Init3bes19

caBIG Community - Support for ECCF Use Cases

Transform ability amongst Research and Clinical Datatypes

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Brian Davis

Shantanu

n/a

Shantanu

Formal Requirements Statement

Requirements Input - Init1sd5
Use Cases - Init1pm16.u (ISO 21090)

Services for data integration

Transformation Services

Knowledge Management /Transformation

Manage & Create Model Metadata

Denise Warzel

Patrick

Baris

Patrick

Formal Requirements Statement; Summary Use Cases

Requirements Input - Init1pm14
Use Cases - Init1pm16.pm4 (ISO 21090)

Services for data integration

UML Modeling in different "Layers"

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Brian Davis

Shantanu

n/a

Shantanu

Formal Requirements Statement

Requirements Input - Init6sd12

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US Department of Defense (USDOD)

NA

No Requirement Specified

Nancy Lawler

---

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---

Formal Requirements Statement

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Requirements around need for secure content

Usage Tracking/Statistics for Semantic Infrastructure Services

Constraint

In supplementary specification Model Admin. Requirement

Ken Buetow

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USHIK and metadata reuse

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Frank Hartel

Patrick

---

---

Formal Requirements Statement

Requirements Input - Init1pm17

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Validation of harmonization

Knowledge Management
Enterprise Vocabulary

Manage & Create Model Metadata
Align Models

Sal Mungal

---

---

---

Formal Requirements Statement

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Assertation test

Visualization tools for existing models

Knowledge Management

Visualize Models

Denise Warzel

Baris

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Requirements Input - Init1bes11

Improve browsing of registered models with visualization tools

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